Gene: Pp3c19_4700

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c19_4700
  • Transcript Identifier Pp3c19_4700V3.2
  • Gene Type Coding gene
  • Location Chr19 : 2696730-2697973 : positive

Gene Family Information

  • ID HOM05D005783
  • #Genes/#Species 135/75
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c19_4700V3.2
  • pacid 32939574
  • alias Phypa_197604
  • alias Phpat.019G015300
  • alias Pp1s300_44V6
  • uniprot A9TRV2

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001522
IEA
GOA Databasepseudouridine synthesis
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0042254
IEA
InterProribosome biogenesis
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0031118
IBA
GOA DatabaserRNA pseudouridine synthesis
GO:0031120
IBA
GOA DatabasesnRNA pseudouridine synthesis
GO:0010197
ISO
PLAZA Integrative Orthologypolar nucleus fusion AT2G20490

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030515
IEA
GOA DatabasesnoRNA binding
GO:0030515
IEA
InterProsnoRNA binding
GO:0070034
IBA
GOA Databasetelomerase RNA binding
GO:0034513
IBA
GOA Databasebox H/ACA snoRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031429
IBA
GOA Databasebox H/ACA snoRNP complex
GO:0090661
IBA
GOA Databasebox H/ACA telomerase RNP complex
GO:0015030
ISO
PLAZA Integrative OrthologyCajal body AT2G20490
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G20490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007264 H/ACA ribonucleoprotein complex, subunit Nop10
IPR036756 H/ACA ribonucleoprotein complex, subunit Nop10 superfamily
Mapman id Description
17.1.1.2.2.1.3 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) rRNA pseudouridylation complex.core component Nop10