Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p00280 Brassica napus
Aa31LG1G11130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.160 Anthoceros agrestis
Actinidia10034 Actinidia chinensis
Actinidia20926 Actinidia chinensis
Actinidia27239 Actinidia chinensis
Ah.05g176680 Amaranthus hybridus
AL1G10580 Arabidopsis lyrata
Aqoxy7G00357 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea
AT1G01760 Arabidopsis thaliana
ATR0594G105 Amborella trichopoda
ATR0594G209 Amborella trichopoda
Atru.BG.56.p Acer truncatum
Atru.chr5.475 Acer truncatum
AUR62003100 Chenopodium quinoa
AUR62004330 Chenopodium quinoa
AUR62019766 Chenopodium quinoa
AUR62033312 Chenopodium quinoa
AUR62033347 Chenopodium quinoa
AUR62034353 Chenopodium quinoa
BcaB03g13612 Brassica carinata
BolC5t28819H Brassica oleracea
BraA10t42305Z Brassica rapa
C05p00290 Brassica napus
CAN.G1535.1 Capsicum annuum
CANSAT56G0536 Cannabis sativa
CARHR000560 Cardamine hirsuta
Carub.0001s0045 Capsella rubella
Ca_23656_v3 Cicer arietinum L.
Cc02_g37770 Coffea canephora
CDE06G1611 Ceratophyllum demersum
Ciclev10020429m.g Citrus clementina
CiPaw.02G029100 Carya illinoinensis
CiPaw.02G029200 Carya illinoinensis
CiPaw.02G029400 Carya illinoinensis
ClCG06G003860 Citrullus lanatus
Cpa.g.sc18.234 Carica papaya
Cre14.g629283 Chlamydomonas reinhardtii
CsaV3_6G000430 Cucumis sativus L.
CSS0024424 Camellia sinensis var. sinensis
CSS0038489 Camellia sinensis var. sinensis
DCAR_015932 Daucus carota
Dinv43791 Davidia involucrata
Duzib138G1514 Durio zibethinus
ECA236G3051 Erigeron canadensis
EL10Ac1g00543 Beta vulgaris
EL10Ac7g17708 Beta vulgaris
Eucgr.E00169 Eucalyptus grandis
Eucgr.E00173 Eucalyptus grandis
FAN01G0854 Fragaria x ananassa
FAN03G1898 Fragaria x ananassa
FAN06G0933 Fragaria x ananassa
FAN06G1549 Fragaria x ananassa
FAN10G4182 Fragaria x ananassa
FvH4_7g13861 Fragaria vesca
Glyma.03G013550 Glycine max
Glyma.03G013600 Glycine max
Glyma.07G073300 Glycine max
Gohir.A12G105400 Gossypium hirsutum
Gohir.A12G105450 Gossypium hirsutum
Gohir.D12G109300 Gossypium hirsutum
Gorai.008G118400 Gossypium raimondii
GSVIVG01026870001 Vitis vinifera
HanXRQChr04g0121611 Helianthus annuus
Haze_15472 Corylus avellana
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla
HPP92_001499 Vanilla planifolia
Hund27291 Selenicereus undatus
Lalb_Chr04g0256771 Lupinus albus
Lalb_Chr10g0097191 Lupinus albus
Lj3g0021692 Lotus japonicus
Lj7C516G5 Lonicera japonica
Lsat_1_v5_gn_7_5060 Lactuca sativa
Manes.01G259400 Manihot esculenta
Mapoly0023s0060 Marchantia polymorpha
MBI17_g21972_MAGBIO Magnolia biondii
MBI18_g01486_MAGBIO Magnolia biondii
MCO02G004 Micromonas commoda
MCO14G396 Micromonas commoda
MCO15G493 Micromonas commoda
MD01G1055100 Malus domestica
MD07G1140100 Malus domestica
MD07G1140200 Malus domestica
Medtr8g031440 Medicago truncatula
MELO3C021221.2 Cucumis melo
MSTRG.17255 Avicennia marina
Nitab4.5_0002262g0010 Nicotiana tabacum
Nitab4.5_0007346g0010 Nicotiana tabacum
Nn6g33496 Nelumbo nucifera
Oeu056356.1 Olea europaea
Oeu056357.1 Olea europaea
Oeu056358.1 Olea europaea
Os04g0683500 Oryza sativa ssp. japonica
Peaxi162Scf00191g01322 Petunia axillaris
PGR042G0923 Punica granatum
PGSC0003DMG400021653 Solanum tuberosum
Phvul.010G096200 Phaseolus vulgaris
Potri.014G081400 Populus trichocarpa
Pp3c4_14060 Physcomitrium patens
PRCOL_00000230 Prasinoderma coloniale
PRCOL_00001873 Prasinoderma coloniale
Prupe.2G164500 Prunus persica
Prupe.2G164800 Prunus persica
Prupe.2G165000 Prunus persica
Psat4g154320 Pisum sativum
PSO478G4474 Papaver somniferum
PSO782G5186 Papaver somniferum
QL08p049437 Quercus lobata
RcHm_v2.0_Chr1g0354081 Rosa chinensis
Sabra14G0059300 Salix brachista
Sc26g0000960 Simmondsia chinensis
Sed0009525 Sechium edule
SEGI_32011 Sequoiadendron giganteum
SEGI_32349 Sequoiadendron giganteum
SGA_v2.0_scaffold277G46666 Striga asiatica
SHI13462 Sapria himalayana
SMO266G0032 Selaginella moellendorffii
SMO332G0015 Selaginella moellendorffii
Solyc05g048810.4 Solanum lycopersicum
Sopen05g028140 Solanum pennellii
Sp1g00540 Schrenkiella parvula
TAR367G0002 Trochodendron aralioides
THA.LOC104817020 Tarenaya hassleriana
Thecc.01G362500 Theobroma cacao
Thhalv10007725m.g Eutrema salsugineum
TPR.G39633 Trifolium pratense
TPR.G4413 Trifolium pratense
TWI23G0914 Tripterygium wilfordii
unitig_26.g9734 Utricularia gibba
vmacro13297 Vaccinium macrocarpon
VMungo0331G1900 Vigna mungo
Zm00001eb067600 Zea mays
Zm00001eb420790 Zea mays

User provided reference genes

Program Settings