Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p26030 Brassica napus
Aa31sc652G50 Aethionema arabicum
Aa31sc652G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1949 Anthoceros agrestis
Actinidia16560 Actinidia chinensis
Ah.09g237450 Amaranthus hybridus
Ah.14g089540 Amaranthus hybridus
AL4G11520 Arabidopsis lyrata
AL4G29560 Arabidopsis lyrata
Aqoxy1G02371 Aquilegia oxysepala
AT2G33800 Arabidopsis thaliana
ATR0217G013 Amborella trichopoda
Atru.chr10.1848 Acer truncatum
AUR62014837 Chenopodium quinoa
AUR62017033 Chenopodium quinoa
BcaC02g07768 Brassica carinata
BolC3t14587H Brassica oleracea
BolC4t27812H Brassica oleracea
BraA04t18105Z Brassica rapa
C04p63370 Brassica napus
CAN.G529.17 Capsicum annuum
CANSAT35G1861 Cannabis sativa
CARHR127910 Cardamine hirsuta
Carub.0004s1547 Capsella rubella
Ca_18557_v3 Cicer arietinum L.
CBR_g50385 Chara braunii
Cc02_g13560 Coffea canephora
Cc02_g13570 Coffea canephora
CDE02G0355 Ceratophyllum demersum
CDE05G0202 Ceratophyllum demersum
Cfa000492 Carpinus fangiana
Cfa000493 Carpinus fangiana
Ciclev10016057m.g Citrus clementina
CiPaw.09G061400 Carya illinoinensis
ClCG01G023060 Citrullus lanatus
COL.COLO4_31445 Corchorus olitorius
Cpa.g.sc464.3 Carica papaya
Cre16.g659950 Chlamydomonas reinhardtii
CsaV3_6G050190 Cucumis sativus L.
CSS0032010 Camellia sinensis var. sinensis
CSS0035615 Camellia sinensis var. sinensis
DCAR_004062 Daucus carota
Dinv17326 Davidia involucrata
Dinv40577 Davidia involucrata
Duzib235G0013 Durio zibethinus
ECA236G3692 Erigeron canadensis
EL10Ac8g20402 Beta vulgaris
Eucgr.D00609 Eucalyptus grandis
FAN11G2270 Fragaria x ananassa
FAN16G3294 Fragaria x ananassa
FAN19G2963 Fragaria x ananassa
FAN21G0060 Fragaria x ananassa
FAN24G2187 Fragaria x ananassa
FAN25G0915 Fragaria x ananassa
FvH4_1g06340 Fragaria vesca
FvH4_2g34180 Fragaria vesca
FvH4_3g08970 Fragaria vesca
Glyma.07G198500 Glycine max
Glyma.13G177900 Glycine max
Gohir.A05G160800 Gossypium hirsutum
Gohir.A06G211100 Gossypium hirsutum
Gohir.D05G163500 Gossypium hirsutum
Gohir.D06G210100 Gossypium hirsutum
Gorai.009G168600 Gossypium raimondii
Gorai.010G256400 Gossypium raimondii
GSVIVG01021083001 Vitis vinifera
HanXRQChr09g0253381 Helianthus annuus
Haze_06422 Corylus avellana
Hma1.2p1_0208F.1_g088250 Hydrangea macrophylla
HPP92_014186 Vanilla planifolia
HPP92_014187 Vanilla planifolia
Hund21218 Selenicereus undatus
Lalb_Chr09g0327691 Lupinus albus
Lalb_Chr16g0383871 Lupinus albus
Lj2A290T34 Lonicera japonica
Lj4g0015429 Lotus japonicus
Lsat_1_v5_gn_7_21701 Lactuca sativa
Manes.16G029300 Manihot esculenta
Mapoly0008s0189 Marchantia polymorpha
MBI18_g13183_MAGBIO Magnolia biondii
MCO06G207 Micromonas commoda
MD00G1115700 Malus domestica
MD10G1292500 Malus domestica
Medtr4g088615 Medicago truncatula
MELO3C007277.2 Cucumis melo
Migut.H01481 Erythranthe guttata
MSTRG.14706 Avicennia marina
Nitab4.5_0005745g0010 Nicotiana tabacum
Nitab4.5_0007329g0010 Nicotiana tabacum
Nitab4.5_0012909g0010 Nicotiana tabacum
Nitab4.5_0013984g0010 Nicotiana tabacum
Nn1g06478 Nelumbo nucifera
Oeu029361.1 Olea europaea
Os03g0452300 Oryza sativa ssp. japonica
Peaxi162Scf02261g00011 Petunia axillaris
PGR004G2009 Punica granatum
PGSC0003DMG400029704 Solanum tuberosum
Phvul.002G229700 Phaseolus vulgaris
Potri.004G045700 Populus trichocarpa
Potri.011G053900 Populus trichocarpa
Pp3c11_10680 Physcomitrium patens
Pp3c1_5050 Physcomitrium patens
Pp3c7_18380 Physcomitrium patens
PRCOL_00000384 Prasinoderma coloniale
Prupe.4G049400 Prunus persica
Psat7g115360 Pisum sativum
PSO541G5241 Papaver somniferum
PSO675G9131 Papaver somniferum
QL05p041319 Quercus lobata
RcHm_v2.0_Chr5g0008741 Rosa chinensis
Rhsim02G0132300 Rhododendron simsii
Sabra04G0028500 Salix brachista
SalBow7G0434 Salvia bowleyana
SalBow7G3926 Salvia bowleyana
Sc05g0007560 Simmondsia chinensis
Sed0019345 Sechium edule
SEGI_11788 Sequoiadendron giganteum
SGA_v2.0_scaffold109G31092 Striga asiatica
SMO347G0200 Selaginella moellendorffii
Solyc02g077990.3 Solanum lycopersicum
Sopen02g022830 Solanum pennellii
Sp4g16190 Schrenkiella parvula
TAR624G0986 Trochodendron aralioides
TAR626G1297 Trochodendron aralioides
THA.LOC104814219 Tarenaya hassleriana
Thecc.06G184600 Theobroma cacao
Thhalv10005174m.g Eutrema salsugineum
TPR.G16335 Trifolium pratense
TWI63G1165 Tripterygium wilfordii
unitig_0.g964 Utricularia gibba
vmacro15918 Vaccinium macrocarpon
VMungo0251G0522 Vigna mungo
VMungo0647G2378 Vigna mungo
VMungo0720G0166 Vigna mungo
VMungo1215G0579 Vigna mungo
VMungo1309G0914 Vigna mungo
Zm00001eb043240 Zea mays

User provided reference genes

Program Settings