Gene: Cfa000493
General Information
Structural Information
- Species Carpinus fangiana
- Gene Identifier Cfa000493
- Transcript Identifier Cfa000493.t1
- Gene Type Coding gene
- Location Cfa01 : 4350258-4351061 : negative
Gene Family Information
- ID HOM05D005621
- #Genes/#Species 137/98
- Phylogenetic origin
- ID ORTHO05D007248
- #Genes/#Species 133/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Cfa000493.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009955 | ISO | PLAZA Integrative Orthology | adaxial/abaxial pattern specification | AT2G33800 |
| GO:0032544 | ISO | PLAZA Integrative Orthology | plastid translation | AT2G33800 |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT2G33800 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT2G33800 |
| GO:1901259 | ISO | PLAZA Integrative Orthology | chloroplast rRNA processing | AT2G33800 |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G33800 |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015935 | ISO | PLAZA Homology (enrichment) | small ribosomal subunit | HOM05D005621 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT2G33800 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G33800 |
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | AT2G33800 |
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | AT2G33800 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | AT2G33800 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT2G33800 |
| GO:0005840 | IEA | InterPro | ribosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.7.2.2.5 | Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS5 |