Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p19500 Brassica napus
A09p55890 Brassica napus
Aa31LG7G12150 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis
Actinidia34728 Actinidia chinensis
Ah.04g160180 Amaranthus hybridus
AL4G16260 Arabidopsis lyrata
Aqoxy4G02744 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea
AT2G25100 Arabidopsis thaliana
ATR0820G296 Amborella trichopoda
Atru.chr12.1043 Acer truncatum
AUR62041514 Chenopodium quinoa
AUR62042081 Chenopodium quinoa
BcaB06g28035 Brassica carinata
BcaC02g08374 Brassica carinata
BolC4t27046H Brassica oleracea
BolC8t51460H Brassica oleracea
BraA04t17544Z Brassica rapa
BraA09t40992Z Brassica rapa
C04p55060 Brassica napus
C08p38870 Brassica napus
CAN.G645.19 Capsicum annuum
CANSAT56G2222 Cannabis sativa
CARHR116600 Cardamine hirsuta
Carub.0004s0468 Capsella rubella
Ca_25662_v3 Cicer arietinum L.
CBR_g29781 Chara braunii
Cc02_g09610 Coffea canephora
CDE08G1414 Ceratophyllum demersum
Cfa026153 Carpinus fangiana
Ciclev10016103m.g Citrus clementina
CiPaw.13G040600 Carya illinoinensis
CiPaw.14G033400 Carya illinoinensis
ClCG05G021840 Citrullus lanatus
ClCG07G015650 Citrullus lanatus
COL.COLO4_38547 Corchorus olitorius
Cpa.g.c34135 Carica papaya
Cre17.g701350 Chlamydomonas reinhardtii
CsaV3_4G003460 Cucumis sativus L.
CSS0000091 Camellia sinensis var. sinensis
CSS0039611 Camellia sinensis var. sinensis
DCAR_006354 Daucus carota
DCAR_006363 Daucus carota
Dinv10930 Davidia involucrata
Dinv11826 Davidia involucrata
Duzib128G1802 Durio zibethinus
ECA238G1649 Erigeron canadensis
EL10Ac4g08688 Beta vulgaris
Eucgr.G02689 Eucalyptus grandis
FAN11G2626 Fragaria x ananassa
FAN16G3025 Fragaria x ananassa
FvH4_3g27560 Fragaria vesca
Glyma.07G162800 Glycine max
Glyma.10G278500 Glycine max
Gohir.A05G287700 Gossypium hirsutum
Gohir.D05G288900 Gossypium hirsutum
Gorai.009G304000 Gossypium raimondii
GSVIVG01010722001 Vitis vinifera
HanXRQChr05g0158341 Helianthus annuus
HanXRQChr11g0342091 Helianthus annuus
Haze_03295 Corylus avellana
Haze_26455 Corylus avellana
HPP92_000055 Vanilla planifolia
Hund06785 Selenicereus undatus
Lalb_Chr02g0146251 Lupinus albus
Lalb_Chr21g0309141 Lupinus albus
Lalb_Chr21g0309151 Lupinus albus
Lalb_Chr21g0309161 Lupinus albus
Lj2C33T4 Lonicera japonica
Lj5g0018811 Lotus japonicus
Lsat_1_v5_gn_2_104400 Lactuca sativa
Lsat_1_v5_gn_5_43780 Lactuca sativa
Lsat_1_v5_gn_9_94660 Lactuca sativa
Manes.10G062100 Manihot esculenta
Mapoly0006s0052 Marchantia polymorpha
MBI01_g02157_MAGBIO Magnolia biondii
MBI01_g19134_MAGBIO Magnolia biondii
MD02G1261400 Malus domestica
MD02G1261600 Malus domestica
Medtr1g111980 Medicago truncatula
MELO3C017716.2 Cucumis melo
Migut.F01603 Erythranthe guttata
MSTRG.23901 Avicennia marina
Nitab4.5_0002586g0090 Nicotiana tabacum
Nitab4.5_0003590g0030 Nicotiana tabacum
Nn6g34854 Nelumbo nucifera
Oeu024809.1 Olea europaea
Os11g0153900 Oryza sativa ssp. japonica
Peaxi162Scf00173g00110 Petunia axillaris
PGR142G4231 Punica granatum
PGSC0003DMG400023970 Solanum tuberosum
Phvul.007G022800 Phaseolus vulgaris
Potri.008G019800 Populus trichocarpa
Potri.010G239500 Populus trichocarpa
Pp3c13_7860 Physcomitrium patens
Prupe.2G069600 Prunus persica
Psat0s1058g0040 Pisum sativum
Psat0s4121g0080 Pisum sativum
Psat0s447g0040 Pisum sativum
Psat4g059000 Pisum sativum
Psat4g071240 Pisum sativum
Psat5g299440 Pisum sativum
Psat6g121040 Pisum sativum
Psat6g162040 Pisum sativum
PSO339G6152 Papaver somniferum
PSO801G0206 Papaver somniferum
QL04p046731 Quercus lobata
RcHm_v2.0_Chr5g0049931 Rosa chinensis
Rhsim09G0141700 Rhododendron simsii
Sabra08G0013100 Salix brachista
Sabra10G0187600 Salix brachista
SalBow6G5745 Salvia bowleyana
Sc09g0005330 Simmondsia chinensis
Sed0022725 Sechium edule
SEGI_12354 Sequoiadendron giganteum
SEGI_12669 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13273 Striga asiatica
SGA_v2.0_scaffold58G20374 Striga asiatica
SGA_v2.0_scaffold62G21319 Striga asiatica
SMO347G0320 Selaginella moellendorffii
Solyc11g006860.2 Solanum lycopersicum
Sopen11g002760 Solanum pennellii
Sp4g04110 Schrenkiella parvula
TAR636G1340 Trochodendron aralioides
THA.LOC104824207 Tarenaya hassleriana
Thecc.10G109100 Theobroma cacao
Thhalv10000575m.g Eutrema salsugineum
TPR.G2473 Trifolium pratense
TWI38G0756 Tripterygium wilfordii
TWI63G1098 Tripterygium wilfordii
unitig_736.g22318 Utricularia gibba
vmacro10312 Vaccinium macrocarpon
VMungo0720G0111 Vigna mungo
Zm00001eb406890 Zea mays
Zm00001eb407010 Zea mays

User provided reference genes

Program Settings