Gene: Solyc11g006860.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g006860.2
  • Transcript Identifier Solyc11g006860.2.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 1446761-1451470 : positive

Gene Family Information

  • ID HOM05D005598
  • #Genes/#Species 137/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g006860.2.1
  • uniprot A0A3Q7IPB9
  • gene_id Solyc11g006860

Descriptions

  • Description Ribonuclease (AHRD V3.3 *** A0A2G2Y6A8_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IBA
GOA Databasemismatch repair
GO:0043137
IBA
GOA DatabaseDNA replication, removal of RNA primer
GO:0016070
IEA
GOA DatabaseRNA metabolic process
GO:0016070
IEA
InterProRNA metabolic process
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004523
IBA
IEA
GOA DatabaseRNA-DNA hybrid ribonuclease activity
GO:0004523
IEA
InterProRNA-DNA hybrid ribonuclease activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0004518
IEA
GOA Databasenuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032299
IBA
GOA Databaseribonuclease H2 complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036397 Ribonuclease H superfamily
IPR024567 Ribonuclease HII/HIII domain
IPR012337 Ribonuclease H-like superfamily
IPR001352 Ribonuclease HII/HIII
IPR023160 Ribonuclease HII, helix-loop-helix cap domain superfamily
IPR004649 Ribonuclease H2, subunit A
Mapman id Description
13.2.4.1.1 Cell cycle organisation.DNA replication.maturation.ribonuclease H2 complex.subunit A