Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG10G6780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1519 Anthoceros agrestis
Actinidia08718 Actinidia chinensis
Ah.13g071020 Amaranthus hybridus
AL1G14320 Arabidopsis lyrata
AL4G30600 Arabidopsis lyrata
Aqoxy5G00887 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G1Q0KH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PTVQ9K Arachis hypogaea
AT1G04635 Arabidopsis thaliana
ATR0579G170 Amborella trichopoda
Atru.chr12.2505 Acer truncatum
Atru.chr12.2528 Acer truncatum
AUR62005952 Chenopodium quinoa
AUR62028113 Chenopodium quinoa
CAN.G140.1 Capsicum annuum
CANSAT64G2376 Cannabis sativa
CARHR003990 Cardamine hirsuta
Carub.0001s0387 Capsella rubella
Ca_05549_v3 Cicer arietinum L.
Cc02_g16080 Coffea canephora
CDE07G1092 Ceratophyllum demersum
Cfa016130 Carpinus fangiana
Ciclev10006132m.g Citrus clementina
Ciclev10023849m.g Citrus clementina
CiPaw.06G038600 Carya illinoinensis
ClCG09G010380 Citrullus lanatus
COL.COLO4_20178 Corchorus olitorius
Cpa.g.sc3.182 Carica papaya
Cre01.g026100 Chlamydomonas reinhardtii
CsaV3_7G024240 Cucumis sativus L.
CSS0004780 Camellia sinensis var. sinensis
CSS0007128 Camellia sinensis var. sinensis
CSS0045409 Camellia sinensis var. sinensis
DCAR_008034 Daucus carota
DCAR_019328 Daucus carota
Dinv17279 Davidia involucrata
Duzib151G0274 Durio zibethinus
ECA247G1253 Erigeron canadensis
EL10Ac3g05135 Beta vulgaris
Eucgr.K00052 Eucalyptus grandis
Eucgr.K00059 Eucalyptus grandis
Eucgr.K00475 Eucalyptus grandis
Eucgr.K00477 Eucalyptus grandis
Eucgr.L02508 Eucalyptus grandis
FAN01G0680 Fragaria x ananassa
FAN03G2203 Fragaria x ananassa
FAN10G1830 Fragaria x ananassa
FAN10G3034 Fragaria x ananassa
FvH4_7g33290 Fragaria vesca
Glyma.02G221100 Glycine max
Glyma.14G188600 Glycine max
Gohir.A03G015000 Gossypium hirsutum
Gohir.A07G102600 Gossypium hirsutum
Gohir.D07G001000 Gossypium hirsutum
Gohir.D07G106600 Gossypium hirsutum
Gorai.001G000500 Gossypium raimondii
Gorai.001G114700 Gossypium raimondii
GSVIVG01038676001 Vitis vinifera
HanXRQChr02g0037361 Helianthus annuus
HanXRQChr02g0037371 Helianthus annuus
Haze_00330 Corylus avellana
Haze_23920 Corylus avellana
HPP92_023794 Vanilla planifolia
Hund09744 Selenicereus undatus
Hund09752 Selenicereus undatus
Lalb_Chr10g0102991 Lupinus albus
Lj1A1031T79 Lonicera japonica
Lj3A584T51 Lonicera japonica
LjContig00155g0018941 Lotus japonicus
Lsat_1_v5_gn_1_26901 Lactuca sativa
Manes.18G108200 Manihot esculenta
Mapoly0096s0024 Marchantia polymorpha
MBI12_g19204_MAGBIO Magnolia biondii
MCO15G566 Micromonas commoda
MD01G1231100 Malus domestica
MD07G1302900 Malus domestica
MD07G1303100 Malus domestica
Medtr5g068650 Medicago truncatula
MELO3C018158.2 Cucumis melo
MELO3C023673.2 Cucumis melo
Migut.F00126 Erythranthe guttata
MSTRG.26955 Avicennia marina
Nitab4.5_0005132g0070 Nicotiana tabacum
Nitab4.5_0022559g0010 Nicotiana tabacum
Nn1g09694 Nelumbo nucifera
Oeu029325.1 Olea europaea
Oeu055421.1 Olea europaea
Os04g0295100 Oryza sativa ssp. japonica
Os05g0270500 Oryza sativa ssp. japonica
Peaxi162Scf00038g02639 Petunia axillaris
Peaxi162Scf00192g00016 Petunia axillaris
PGR142G4477 Punica granatum
PGSC0003DMG400032145 Solanum tuberosum
Phvul.001G010300 Phaseolus vulgaris
Phvul.003G000356 Phaseolus vulgaris
Phvul.003G000382 Phaseolus vulgaris
Phvul.008G188200 Phaseolus vulgaris
Phvul.L004350 Phaseolus vulgaris
Phvul.L006525 Phaseolus vulgaris
Phvul.L008700 Phaseolus vulgaris
Potri.015G001000 Populus trichocarpa
Potri.015G001200 Populus trichocarpa
Pp3c14_9250 Physcomitrium patens
Prupe.2G321800 Prunus persica
Psat2g060440 Pisum sativum
Psat2g148960 Pisum sativum
PSO170G1626 Papaver somniferum
PSO782G3129 Papaver somniferum
QL04p035447 Quercus lobata
QL09p006020 Quercus lobata
QL09p006048 Quercus lobata
RcHm_v2.0_Chr1g0383271 Rosa chinensis
RcHm_v2.0_Chr3g0479561 Rosa chinensis
Rhsim03G0218300 Rhododendron simsii
Sabra15G0000700 Salix brachista
Sc13g0010680 Simmondsia chinensis
Sed0027394 Sechium edule
SEGI_01150 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16871 Striga asiatica
SHI13471 Sapria himalayana
SMO356G0648 Selaginella moellendorffii
Solyc01g006260.4 Solanum lycopersicum
Sopen01g002260 Solanum pennellii
Sp1g03470 Schrenkiella parvula
Sp4g14630 Schrenkiella parvula
TAR362G0055 Trochodendron aralioides
TAR383G0718 Trochodendron aralioides
TAR629G0354 Trochodendron aralioides
THA.LOC104820657 Tarenaya hassleriana
Thecc.04G200100 Theobroma cacao
Thhalv10009004m.g Eutrema salsugineum
Thhalv10017414m.g Eutrema salsugineum
TPR.G27917 Trifolium pratense
TPR.G5849 Trifolium pratense
TWI18G0511 Tripterygium wilfordii
unitig_0.g2433 Utricularia gibba
vmacro06473 Vaccinium macrocarpon
VMungo0647G1380 Vigna mungo
Zm00001eb200370 Zea mays

User provided reference genes

Program Settings