Gene: PGSC0003DMG400032145

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400032145
  • Transcript Identifier PGSC0003DMT400081880
  • Gene Type Coding gene
  • Location ST4.03ch01 : 1739561-1740569 : positive

Gene Family Information

  • ID HOM05D005446
  • #Genes/#Species 140/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37437640
  • id PGSC0003DMG400032145.v4.03
  • uniprot M1D575

Descriptions

  • Description Lipoate-protein ligase B
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001682
IEA
GOA DatabasetRNA 5'-leader removal
GO:0001682
IEA
InterProtRNA 5'-leader removal
GO:0090501
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0008033
IBA
IEA
GOA DatabasetRNA processing
GO:0006364
IBA
GOA DatabaserRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004526
IEA
GOA Databaseribonuclease P activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G04635

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030677
IEA
GOA Databaseribonuclease P complex
GO:0030677
IEA
InterProribonuclease P complex
GO:0005655
IBA
GOA Databasenucleolar ribonuclease P complex
GO:0000172
IBA
GOA Databaseribonuclease MRP complex
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G04635

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038085 RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamily
IPR002759 RNase P subunit Pop5/Rpp14/Rnp2-like
Mapman id Description
16.6.3.5 RNA processing.ribonuclease activities.RNA-dependent RNase P complex.component RPP14/POP5