Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p26880 Brassica napus
A03p30090 Brassica napus
A05p41450 Brassica napus
Aa31LG5G9140 Aethionema arabicum
Actinidia07565 Actinidia chinensis
Ah.10g032730 Amaranthus hybridus
AL4G19530 Arabidopsis lyrata
Aqoxy7G02630 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HNJF4G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K4ERET Arachis hypogaea
AT2G26590 Arabidopsis thaliana
ATR0626G233 Amborella trichopoda
Atru.chr7.1013 Acer truncatum
AUR62020729 Chenopodium quinoa
AUR62027984 Chenopodium quinoa
BcaB01g03027 Brassica carinata
BcaC01g04908 Brassica carinata
BcaC01g04909 Brassica carinata
BcaC04g22417 Brassica carinata
BolC3t15563H Brassica oleracea
BolC3t15564H Brassica oleracea
BraA03t11899Z Brassica rapa
C03p32210 Brassica napus
C03p32220 Brassica napus
C03p32230 Brassica napus
C09p19590 Brassica napus
CAN.G146.2 Capsicum annuum
CANSAT80G1260 Cannabis sativa
CARHR118490 Cardamine hirsuta
Carub.0004s0844 Capsella rubella
Ca_17431_v3 Cicer arietinum L.
Ca_17440_v3 Cicer arietinum L.
CBR_g28055 Chara braunii
Cc00_g00070 Coffea canephora
CDE02G2220 Ceratophyllum demersum
CDE06G0990 Ceratophyllum demersum
Cfa010023 Carpinus fangiana
Cfa020755 Carpinus fangiana
Ciclev10008923m.g Citrus clementina
CiPaw.15G161100 Carya illinoinensis
CiPaw.16G104300 Carya illinoinensis
ClCG11G011350 Citrullus lanatus
COL.COLO4_23410 Corchorus olitorius
Cpa.g.sc115.19 Carica papaya
Cre11.g469450 Chlamydomonas reinhardtii
CsaV3_2G009110 Cucumis sativus L.
CSS0000968 Camellia sinensis var. sinensis
DCAR_020460 Daucus carota
Dinv00323 Davidia involucrata
Dinv12613 Davidia involucrata
Dinv26479 Davidia involucrata
Duzib168G0912 Durio zibethinus
Duzib170G0675 Durio zibethinus
ECA234G2663 Erigeron canadensis
EL10Ac2g03624 Beta vulgaris
Eucgr.C00062 Eucalyptus grandis
FAN07G1413 Fragaria x ananassa
FAN17G2613 Fragaria x ananassa
FvH4_4g06040 Fragaria vesca
Glyma.05G220700 Glycine max
Glyma.08G027200 Glycine max
Gohir.A08G017100 Gossypium hirsutum
Gohir.D08G027500 Gossypium hirsutum
Gorai.004G024500 Gossypium raimondii
GSVIVG01032266001 Vitis vinifera
HanXRQChr09g0242981 Helianthus annuus
HanXRQChr09g0242991 Helianthus annuus
HanXRQChr09g0246171 Helianthus annuus
HanXRQChr09g0248391 Helianthus annuus
HanXRQChr10g0309531 Helianthus annuus
HanXRQChr13g0395691 Helianthus annuus
Haze_19097 Corylus avellana
Hma1.2p1_0314F.1_g122070 Hydrangea macrophylla
Hma1.2p1_0314F.1_g122080 Hydrangea macrophylla
HPP92_015797 Vanilla planifolia
HPP92_028347 Vanilla planifolia
Hund03231 Selenicereus undatus
Lalb_Chr05g0223801 Lupinus albus
Lalb_Chr05g0223811 Lupinus albus
Lalb_Chr09g0332001 Lupinus albus
Lj4g0004845 Lotus japonicus
Lj5C772G2 Lonicera japonica
Lsat_1_v5_gn_5_80620 Lactuca sativa
Manes.02G221800 Manihot esculenta
Mapoly0011s0124 Marchantia polymorpha
MBI13_g31572_MAGBIO Magnolia biondii
MCO02G027 Micromonas commoda
MD13G1232400 Malus domestica
MD16G1238000 Malus domestica
Medtr8g101230 Medicago truncatula
MELO3C003927.2 Cucumis melo
Migut.L01918 Erythranthe guttata
MSTRG.26517 Avicennia marina
Nitab4.5_0000899g0030 Nicotiana tabacum
Nitab4.5_0004036g0030 Nicotiana tabacum
Nn8g41135 Nelumbo nucifera
Oeu028820.1 Olea europaea
Os05g0594800 Oryza sativa ssp. japonica
Peaxi162Scf01184g00140 Petunia axillaris
PGR142G0598 Punica granatum
Phvul.002G302400 Phaseolus vulgaris
Potri.003G027520 Populus trichocarpa
Potri.003G027722 Populus trichocarpa
Potri.006G078800 Populus trichocarpa
Pp3c21_370 Physcomitrium patens
Prupe.1G063800 Prunus persica
Psat7g020920 Pisum sativum
PSO063G4940 Papaver somniferum
PSO170G6081 Papaver somniferum
QL11p008649 Quercus lobata
RcHm_v2.0_Chr4g0397601 Rosa chinensis
Rhsim04G0099700 Rhododendron simsii
Sabra06G0059700 Salix brachista
SalBow5G4362 Salvia bowleyana
Sc14g0006300 Simmondsia chinensis
Sc14g0007060 Simmondsia chinensis
Sed0003073 Sechium edule
SEGI_14233 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09605 Striga asiatica
SGA_v2.0_scaffold485G52365 Striga asiatica
SHI03135 Sapria himalayana
SMO116G0379 Selaginella moellendorffii
SMO356G0234 Selaginella moellendorffii
Solyc07g017400.3 Solanum lycopersicum
Sopen07g006100 Solanum pennellii
Sp4g09300 Schrenkiella parvula
TAR383G0382 Trochodendron aralioides
TAR383G1024 Trochodendron aralioides
THA.LOC104815270 Tarenaya hassleriana
Thecc.09G196900 Theobroma cacao
Thhalv10000977m.g Eutrema salsugineum
Thhalv10016855m.g Eutrema salsugineum
TPR.G25470 Trifolium pratense
TWI63G1185 Tripterygium wilfordii
unitig_85.g27245 Utricularia gibba
vmacro04822 Vaccinium macrocarpon
vmacro07726 Vaccinium macrocarpon
vmacro20760 Vaccinium macrocarpon
VMungo0251G0086 Vigna mungo
Zm00001eb297230 Zea mays

User provided reference genes

Program Settings