Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p16200 Brassica napus
A10p09140 Brassica napus
Aa31LG2G12830 Aethionema arabicum
Aa31LG3G7870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1408 Anthoceros agrestis
Actinidia24694 Actinidia chinensis
Actinidia25002 Actinidia chinensis
Actinidia31779 Actinidia chinensis
Ah.07g207760 Amaranthus hybridus
AL8G25710 Arabidopsis lyrata
Aqoxy7G00756 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GK6DAA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZY1HAF Arachis hypogaea
AT5G51410 Arabidopsis thaliana
ATR0317G033 Amborella trichopoda
Atru.chr1.729 Acer truncatum
AUR62002204 Chenopodium quinoa
AUR62015497 Chenopodium quinoa
BcaB08g35502 Brassica carinata
BcaC01g06087 Brassica carinata
BcaC01g06118 Brassica carinata
BcaC01g06119 Brassica carinata
BcaC02g12419 Brassica carinata
BcaC04g20678 Brassica carinata
BolC3t14296H Brassica oleracea
BolC9t56949H Brassica oleracea
BraA03t10911Z Brassica rapa
BraA10t42998Z Brassica rapa
C03p19080 Brassica napus
C09p40690 Brassica napus
CAN.G48.17 Capsicum annuum
CANSAT56G0662 Cannabis sativa
CANSAT56G2002 Cannabis sativa
CARHR264130 Cardamine hirsuta
Carub.0008s1144 Capsella rubella
Ca_19629_v3 Cicer arietinum L.
CBR_g19666 Chara braunii
Cc02_g04300 Coffea canephora
CDE09G0628 Ceratophyllum demersum
CDE11G0874 Ceratophyllum demersum
Ciclev10005332m.g Citrus clementina
CiPaw.03G093200 Carya illinoinensis
CiPaw.04G059900 Carya illinoinensis
ClCG01G005490 Citrullus lanatus
COL.COLO4_14120 Corchorus olitorius
Cpa.g.sc3.325 Carica papaya
Cre14.g621300 Chlamydomonas reinhardtii
CsaV3_5G005710 Cucumis sativus L.
CSS0007267 Camellia sinensis var. sinensis
CSS0036499 Camellia sinensis var. sinensis
CSS0044195 Camellia sinensis var. sinensis
DCAR_014622 Daucus carota
DCAR_018112 Daucus carota
Dinv28577 Davidia involucrata
Dinv28578 Davidia involucrata
Duzib068G1327 Durio zibethinus
ECA232G2337 Erigeron canadensis
EL10Ac3g05845 Beta vulgaris
FAN01G0551 Fragaria x ananassa
FAN03G1550 Fragaria x ananassa
FAN06G2607 Fragaria x ananassa
FAN06G4549 Fragaria x ananassa
FAN10G2289 Fragaria x ananassa
FvH4_7g27480 Fragaria vesca
Glyma.09G224100 Glycine max
Glyma.12G012900 Glycine max
Gohir.A11G040000 Gossypium hirsutum
Gohir.A12G198200 Gossypium hirsutum
Gohir.D11G043300 Gossypium hirsutum
Gohir.D12G200800 Gossypium hirsutum
Gorai.007G046600 Gossypium raimondii
Gorai.008G215900 Gossypium raimondii
GSVIVG01018660001 Vitis vinifera
HanXRQChr15g0486001 Helianthus annuus
HanXRQChr16g0512781 Helianthus annuus
Haze_13873 Corylus avellana
Hma1.2p1_0432F.1_g151770 Hydrangea macrophylla
HPP92_025863 Vanilla planifolia
Hund27167 Selenicereus undatus
Lalb_Chr01g0000671 Lupinus albus
Lalb_Chr03g0024261 Lupinus albus
Lalb_Chr19g0140131 Lupinus albus
Lj1A979T79 Lonicera japonica
Lj3g0000265 Lotus japonicus
Lj8A42G20 Lonicera japonica
Lsat_1_v5_gn_2_109780 Lactuca sativa
Lsat_1_v5_gn_9_52040 Lactuca sativa
Manes.14G036100 Manihot esculenta
Mapoly0012s0200 Marchantia polymorpha
Mapoly0021s0077 Marchantia polymorpha
MCO10G026 Micromonas commoda
MCO11G692 Micromonas commoda
MCO12G342 Micromonas commoda
MD01G1182700 Malus domestica
MD07G1253500 Malus domestica
Medtr0004s0480 Medicago truncatula
MELO3C005382.2 Cucumis melo
Migut.F01184 Erythranthe guttata
MSTRG.130 Avicennia marina
Nitab4.5_0002149g0040 Nicotiana tabacum
Nitab4.5_0002816g0030 Nicotiana tabacum
Nn6g33975 Nelumbo nucifera
Oeu006946.1 Olea europaea
Oeu016670.1 Olea europaea
Oeu028185.1 Olea europaea
Oeu035954.1 Olea europaea
Os07g0456400 Oryza sativa ssp. japonica
Peaxi162Scf00023g01212 Petunia axillaris
Peaxi162Scf00241g00113 Petunia axillaris
PGSC0003DMG400014826 Solanum tuberosum
Phvul.011G015900 Phaseolus vulgaris
Potri.001G124300 Populus trichocarpa
Potri.003G109000 Populus trichocarpa
Pp3c15_9680 Physcomitrium patens
Pp3c2_28450 Physcomitrium patens
Prupe.2G276900 Prunus persica
Psat7g149880 Pisum sativum
QL09p005736 Quercus lobata
RcHm_v2.0_Chr1g0374271 Rosa chinensis
Sabra01G0095800 Salix brachista
Sabra03G0075500 Salix brachista
SalBow2G0907 Salvia bowleyana
Sc25g0000060 Simmondsia chinensis
Sed0014713 Sechium edule
Sed0026742 Sechium edule
SEGI_16304 Sequoiadendron giganteum
SGA_v2.0_scaffold136G35003 Striga asiatica
SGA_v2.0_scaffold56G19944 Striga asiatica
SHI13985 Sapria himalayana
SMO143G0228 Selaginella moellendorffii
Solyc03g093160.3 Solanum lycopersicum
Sopen03g023960 Solanum pennellii
Sp6g13580 Schrenkiella parvula
TAR374G0653 Trochodendron aralioides
TAR375G0291 Trochodendron aralioides
THA.LOC104808281 Tarenaya hassleriana
Thecc.03G155500 Theobroma cacao
Thhalv10014057m.g Eutrema salsugineum
TPR.G20265 Trifolium pratense
unitig_62.g23917 Utricularia gibba
vmacro09910 Vaccinium macrocarpon
Zm00001eb096610 Zea mays
Zm00001eb306510 Zea mays

User provided reference genes

Program Settings