Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p24950 Brassica napus
A05p13230 Brassica napus
A10p03670 Brassica napus
Aa31LG1G19610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3933 Anthoceros agrestis
Actinidia08387 Actinidia chinensis
AL1G14900 Arabidopsis lyrata
AL4G27860 Arabidopsis lyrata
Aqoxy1G02098 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B9TUKK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SJMT99 Arachis hypogaea
AT1G05140 Arabidopsis thaliana
AT2G32480 Arabidopsis thaliana
ATR0069G018 Amborella trichopoda
ATR0069G030 Amborella trichopoda
ATR0681G167 Amborella trichopoda
ATR0681G370 Amborella trichopoda
ATR0753G011 Amborella trichopoda
ATR0775G001 Amborella trichopoda
ATR0794G038 Amborella trichopoda
ATR0820G169 Amborella trichopoda
Atru.chr6.3194 Acer truncatum
AUR62000009 Chenopodium quinoa
AUR62019178 Chenopodium quinoa
AUR62019179 Chenopodium quinoa
BcaB02g10466 Brassica carinata
BcaB06g28596 Brassica carinata
BcaC02g07921 Brassica carinata
BcaC02g11315 Brassica carinata
BcaC05g24426 Brassica carinata
BolC4t23267H Brassica oleracea
BolC4t27673H Brassica oleracea
BolC5t29115H Brassica oleracea
BraA05t20264Z Brassica rapa
BraA10t42640Z Brassica rapa
C04p17170 Brassica napus
C04p61940 Brassica napus
C05p03380 Brassica napus
CAN.G1296.1 Capsicum annuum
CANSAT64G1405 Cannabis sativa
CARHR004610 Cardamine hirsuta
CARHR126300 Cardamine hirsuta
Carub.0001s0441 Capsella rubella
Carub.0004s1382 Capsella rubella
Ca_03278_v3 Cicer arietinum L.
CBR_g50915 Chara braunii
Cc05_g04360 Coffea canephora
CDE12G0066 Ceratophyllum demersum
Ciclev10015229m.g Citrus clementina
CiPaw.03G159400 Carya illinoinensis
CiPaw.04G115200 Carya illinoinensis
ClCG02G008830 Citrullus lanatus
COL.COLO4_11250 Corchorus olitorius
Cpa.g.sc87.86 Carica papaya
Cre03.g144164 Chlamydomonas reinhardtii
Cre17.g730100 Chlamydomonas reinhardtii
CsaV3_2G034890 Cucumis sativus L.
CSS0024072 Camellia sinensis var. sinensis
CSS0027646 Camellia sinensis var. sinensis
DCAR_012943 Daucus carota
Dinv05423 Davidia involucrata
Dinv39717 Davidia involucrata
Duzib251G0812 Durio zibethinus
ECA240G1660 Erigeron canadensis
EL10Ac4g10369 Beta vulgaris
Eucgr.A01121 Eucalyptus grandis
FAN02G3120 Fragaria x ananassa
FAN05G3018 Fragaria x ananassa
FAN09G2150 Fragaria x ananassa
FvH4_6g43160 Fragaria vesca
Glyma.06G306700 Glycine max
Glyma.12G098200 Glycine max
Gohir.A12G174000 Gossypium hirsutum
Gohir.D12G176700 Gossypium hirsutum
Gorai.008G189100 Gossypium raimondii
GSVIVG01030436001 Vitis vinifera
HanXRQChr10g0295521 Helianthus annuus
Haze_12853 Corylus avellana
HPP92_012410 Vanilla planifolia
Lalb_Chr03g0028691 Lupinus albus
Lalb_Chr19g0135951 Lupinus albus
Lj1P766T34 Lonicera japonica
Lj3g0003317 Lotus japonicus
Lsat_1_v5_gn_9_107520 Lactuca sativa
Manes.12G074100 Manihot esculenta
Mapoly0064s0026 Marchantia polymorpha
MBI02_g21883_MAGBIO Magnolia biondii
MCO09G462 Micromonas commoda
MD09G1110000 Malus domestica
Medtr4g048590 Medicago truncatula
MELO3C019273.2 Cucumis melo
Migut.H01227 Erythranthe guttata
MSTRG.14149 Avicennia marina
Nitab4.5_0002137g0020 Nicotiana tabacum
Nitab4.5_0009179g0010 Nicotiana tabacum
Nn1g03500 Nelumbo nucifera
Oeu007114.1 Olea europaea
Os03g0579000 Oryza sativa ssp. japonica
Os05g0388025 Oryza sativa ssp. japonica
Os07g0683025 Oryza sativa ssp. japonica
Peaxi162Scf00007g00072 Petunia axillaris
PGR042G1729 Punica granatum
PGSC0003DMG400028948 Solanum tuberosum
Phvul.011G103000 Phaseolus vulgaris
Potri.002G228600 Populus trichocarpa
Potri.014G154000 Populus trichocarpa
Pp3c18_14380 Physcomitrium patens
Pp3c19_19130 Physcomitrium patens
Pp3c9_3170 Physcomitrium patens
PRCOL_00005585 Prasinoderma coloniale
Prupe.3G216500 Prunus persica
Psat0s4267g0040 Pisum sativum
PSO541G4463 Papaver somniferum
PSO675G7879 Papaver somniferum
QL08p032961 Quercus lobata
RcHm_v2.0_Chr2g0159081 Rosa chinensis
Rhsim04G0052800 Rhododendron simsii
Sabra02G0174700 Salix brachista
Sabra14G0116500 Salix brachista
SalBow1G7639 Salvia bowleyana
Sc21g0001390 Simmondsia chinensis
Sed0016669 Sechium edule
SEGI_01159 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37576 Striga asiatica
SMO163G0076 Selaginella moellendorffii
SMO351G0125 Selaginella moellendorffii
Solyc07g052290.1 Solanum lycopersicum
Sopen07g025910 Solanum pennellii
Sp1g03990 Schrenkiella parvula
Sp4g14840 Schrenkiella parvula
SpUn0024_0150 Schrenkiella parvula
TAR624G0116 Trochodendron aralioides
TAR626G0150 Trochodendron aralioides
THA.LOC104826148 Tarenaya hassleriana
Thecc.02G365500 Theobroma cacao
Thhalv10017977m.g Eutrema salsugineum
TPR.G4668 Trifolium pratense
TWI18G0506 Tripterygium wilfordii
TWI36G1224 Tripterygium wilfordii
unitig_749.g13943 Utricularia gibba
Zm00001eb049010 Zea mays
Zm00001eb219720 Zea mays
Zm00001eb417680 Zea mays

User provided reference genes

Program Settings