Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p47780 Brassica napus
Aa31LG5G3600 Aethionema arabicum
Actinidia04478 Actinidia chinensis
Actinidia05464 Actinidia chinensis
Actinidia08442 Actinidia chinensis
Actinidia08443 Actinidia chinensis
Actinidia40086 Actinidia chinensis
AL8G16650 Arabidopsis lyrata
Aqoxy5G00317 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7CP98C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SM0BS0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TEF2FC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YIX0R7 Arachis hypogaea
AT5G43630 Arabidopsis thaliana
ATR0665G554 Amborella trichopoda
Atru.chr4.2229 Acer truncatum
BcaB07g30565 Brassica carinata
BcaC06g31686 Brassica carinata
BcaC06g34639 Brassica carinata
BolC7t43150H Brassica oleracea
BraA06t27646Z Brassica rapa
C07p26220 Brassica napus
CAN.G1007.13 Capsicum annuum
CARHR006260 Cardamine hirsuta
Carub.0008s0502 Capsella rubella
Ca_09836_v3 Cicer arietinum L.
Ca_24427_v3 Cicer arietinum L.
Cc00_g10240 Coffea canephora
Cc00_g33140 Coffea canephora
Cc03_g04860 Coffea canephora
Cfa008379 Carpinus fangiana
Ciclev10004215m.g Citrus clementina
CiPaw.01G190300 Carya illinoinensis
CiPaw.02G116300 Carya illinoinensis
ClCG05G004600 Citrullus lanatus
COL.COLO4_15792 Corchorus olitorius
Cpa.g.sc58.48 Carica papaya
CsaV3_3G012580 Cucumis sativus L.
CSS0027429 Camellia sinensis var. sinensis
CSS0043582 Camellia sinensis var. sinensis
DCAR_002351 Daucus carota
Dinv29910 Davidia involucrata
Dinv29911 Davidia involucrata
Dinv44634 Davidia involucrata
Dinv44635 Davidia involucrata
Duzib052G0218 Durio zibethinus
Duzib151G0402 Durio zibethinus
Duzib212G1015 Durio zibethinus
ECA233G4142 Erigeron canadensis
ECA240G1753 Erigeron canadensis
Eucgr.H03158 Eucalyptus grandis
FAN12G0451 Fragaria x ananassa
FAN17G1158 Fragaria x ananassa
FAN22G1888 Fragaria x ananassa
FvH4_4g02690 Fragaria vesca
Glyma.01G234600 Glycine max
Glyma.10G185100 Glycine max
Glyma.11G008300 Glycine max
Glyma.20G205250 Glycine max
Glyma.20G205301 Glycine max
Gohir.A09G223300 Gossypium hirsutum
Gohir.D09G225300 Gossypium hirsutum
Gorai.006G246800 Gossypium raimondii
GSVIVG01018119001 Vitis vinifera
HanXRQChr03g0092361 Helianthus annuus
HanXRQChr13g0424471 Helianthus annuus
HanXRQChr15g0468851 Helianthus annuus
Haze_11300 Corylus avellana
Hma1.2p1_0650F.1_g195420 Hydrangea macrophylla
HPP92_018440 Vanilla planifolia
HPP92_026292 Vanilla planifolia
HPP92_026293 Vanilla planifolia
Lalb_Chr02g0150411 Lupinus albus
Lalb_Chr06g0169311 Lupinus albus
Lalb_Chr09g0320051 Lupinus albus
Lj5g0013708 Lotus japonicus
Lj6A656T71 Lonicera japonica
Lj6A656T72 Lonicera japonica
LjContig00222g0005017 Lotus japonicus
Lsat_1_v5_gn_3_123200 Lactuca sativa
Lsat_1_v5_gn_5_72841 Lactuca sativa
Manes.03G168800 Manihot esculenta
Manes.15G037000 Manihot esculenta
MBI04_g07579_MAGBIO Magnolia biondii
MBI04_g45851_MAGBIO Magnolia biondii
MD13G1207300 Malus domestica
MD16G1208700 Malus domestica
Medtr1g075280 Medicago truncatula
Medtr5g007040 Medicago truncatula
Medtr6g046940 Medicago truncatula
MELO3C006469.2 Cucumis melo
Migut.G00437 Erythranthe guttata
Migut.N00239 Erythranthe guttata
MSTRG.24702 Avicennia marina
MSTRG.9924 Avicennia marina
Nitab4.5_0000036g0130 Nicotiana tabacum
Nitab4.5_0000525g0230 Nicotiana tabacum
Nitab4.5_0000525g0240 Nicotiana tabacum
Nitab4.5_0004798g0010 Nicotiana tabacum
Nitab4.5_0004798g0040 Nicotiana tabacum
Nn1g02609 Nelumbo nucifera
Nn3g19539 Nelumbo nucifera
Oeu003588.2 Olea europaea
Oeu049793.2 Olea europaea
Os01g0775100 Oryza sativa ssp. japonica
Peaxi162Scf00813g00016 Petunia axillaris
PGSC0003DMG400001126 Solanum tuberosum
Phvul.002G042000 Phaseolus vulgaris
Phvul.007G125900 Phaseolus vulgaris
Potri.008G162150 Populus trichocarpa
Potri.008G162500 Populus trichocarpa
Potri.010G076700 Populus trichocarpa
Prupe.1G030800 Prunus persica
Psat2g189680 Pisum sativum
Psat4g092760 Pisum sativum
PSO210G6035 Papaver somniferum
PSO832G3620 Papaver somniferum
QL06p015741 Quercus lobata
RcHm_v2.0_Chr4g0390511 Rosa chinensis
RcHm_v2.0_Chr7g0198831 Rosa chinensis
Rhsim04G0190300 Rhododendron simsii
Sabra08G0123900 Salix brachista
Sabra10G0032100 Salix brachista
SalBow3G4073 Salvia bowleyana
Sc13g0005040 Simmondsia chinensis
Sed0002321 Sechium edule
Sed0017180 Sechium edule
SGA_v2.0_scaffold88G27281 Striga asiatica
Solyc09g083390.3 Solanum lycopersicum
Sopen09g032310 Solanum pennellii
Sp2g08420 Schrenkiella parvula
TAR362G0225 Trochodendron aralioides
TAR633G1135 Trochodendron aralioides
THA.LOC104815984 Tarenaya hassleriana
Thecc.04G246200 Theobroma cacao
Thhalv10003150m.g Eutrema salsugineum
TPR.G17184 Trifolium pratense
TPR.G27199 Trifolium pratense
TPR.G37888 Trifolium pratense
TWI73G0531 Tripterygium wilfordii
vmacro08412 Vaccinium macrocarpon
VMungo0720G1316 Vigna mungo
VMungo1215G2763 Vigna mungo
Zm00001eb151720 Zea mays

User provided reference genes

Program Settings