Gene: Nitab4.5_0004798g0040

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0004798g0040
  • Transcript Identifier Nitab4.5_0004798g0040.1
  • Gene Type Coding gene
  • Location Nitab4.5_0004798 : 130422-133109 : positive

Gene Family Information

  • ID HOM05D005259
  • #Genes/#Species 144/82
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0004798g0040.1
  • SR1-identifier Nta22g15960.1

Descriptions

  • Description Zinc finger, CCHC-type, Cytochrome c oxidase, subunit I, Cytochrome c oxidase, subunit I domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009060
IEA
InterProaerobic respiration
GO:0001173
ISO
PLAZA Integrative OrthologyDNA-templated transcriptional start site selection AT5G43630
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G43630
GO:0009785
ISO
PLAZA Integrative Orthologyblue light signaling pathway AT5G43630
GO:0009637
ISO
PLAZA Integrative Orthologyresponse to blue light AT5G43630

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding
GO:0004129
IEA
InterProcytochrome-c oxidase activity
GO:0020037
IEA
InterProheme binding
GO:0003677
ISO
PLAZA Homology (enrichment)DNA binding HOM05D005259
GO:0008134
ISO
PLAZA Integrative Orthologytranscription factor binding AT5G43630

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
InterProintegral component of membrane
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G43630

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036927 Cytochrome c oxidase-like, subunit I superfamily
IPR001878 Zinc finger, CCHC-type
IPR036875 Zinc finger, CCHC-type superfamily
IPR000883 Cytochrome c oxidase subunit I
Mapman id Description
27.1.5.4 Multi-process regulation.circadian clock system.morning element regulation.repression factor (TZP)