Gene: Solyc09g083390.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g083390.3
  • Transcript Identifier Solyc09g083390.3.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 65140880-65143110 : negative

Gene Family Information

  • ID HOM05D005259
  • #Genes/#Species 144/82
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g083390.3.1
  • uniprot A0A3Q7J2P0
  • gene_id Solyc09g083390

Descriptions

  • Description zinc knuckle (CCHC-type) family protein (AHRD V3.3 *-* AT5G43630.4)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001173
ISO
PLAZA Integrative OrthologyDNA-templated transcriptional start site selection AT5G43630
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G43630
GO:0009785
ISO
PLAZA Integrative Orthologyblue light signaling pathway AT5G43630
GO:0009637
ISO
PLAZA Integrative Orthologyresponse to blue light AT5G43630

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:1990269
IBA
GOA DatabaseRNA polymerase II C-terminal domain phosphoserine binding
GO:0008134
ISO
PLAZA Integrative Orthologytranscription factor binding AT5G43630

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016593
IBA
GOA DatabaseCdc73/Paf1 complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G43630

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
No InterPro domains detected for this gene.
Mapman id Description
27.1.5.4 Multi-process regulation.circadian clock system.morning element regulation.repression factor (TZP)