Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p44170 Brassica napus
Aa31LG5G13450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1992 Anthoceros agrestis
Actinidia07010 Actinidia chinensis
Actinidia24488 Actinidia chinensis
Ah.04g161260 Amaranthus hybridus
AL3G12410 Arabidopsis lyrata
AL6G27810 Arabidopsis lyrata
Aqoxy3G02241 Aquilegia oxysepala
Aqoxy5G01637 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F0IXSY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T3IE7U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZTB6Z9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZY7ZXH Arachis hypogaea
AT3G02950 Arabidopsis thaliana
AT5G16790 Arabidopsis thaliana
ATR0829G067 Amborella trichopoda
Atru.chr5.727 Acer truncatum
AUR62000723 Chenopodium quinoa
AUR62005241 Chenopodium quinoa
BolC5t35050H Brassica oleracea
BraSC90t46693Z Brassica rapa
C05p63850 Brassica napus
CAN.G1085.4 Capsicum annuum
CAN.G714.6 Capsicum annuum
CANSAT56G1354 Cannabis sativa
CARHR076980 Cardamine hirsuta
CARHR196370 Cardamine hirsuta
Carub.0003s0208 Capsella rubella
Carub.0006s1501 Capsella rubella
Ca_00419_v3 Cicer arietinum L.
CBR_g4125 Chara braunii
CBR_g51237 Chara braunii
Cc01_g07100 Coffea canephora
CDE02G3757 Ceratophyllum demersum
CDE11G0176 Ceratophyllum demersum
Cfa016051 Carpinus fangiana
Ciclev10021949m.g Citrus clementina
CiPaw.06G034400 Carya illinoinensis
ClCG09G016930 Citrullus lanatus
COL.COLO4_15239 Corchorus olitorius
Cpa.g.sc14.58 Carica papaya
Cre03.g182350 Chlamydomonas reinhardtii
CsaV3_2G036420 Cucumis sativus L.
CSS0011166 Camellia sinensis var. sinensis
DCAR_016143 Daucus carota
Dinv16767 Davidia involucrata
Dinv35897 Davidia involucrata
Duzib106G0272 Durio zibethinus
Duzib177G0947 Durio zibethinus
ECA240G0118 Erigeron canadensis
EL10Ac6g14989 Beta vulgaris
Eucgr.D02531 Eucalyptus grandis
FAN15G0398 Fragaria x ananassa
FAN20G0932 Fragaria x ananassa
FAN23G1307 Fragaria x ananassa
FAN24G0415 Fragaria x ananassa
FAN27G2246 Fragaria x ananassa
FvH4_2g13990 Fragaria vesca
FvH4_4g00100 Fragaria vesca
Glyma.07G081200 Glycine max
Glyma.13G232100 Glycine max
Glyma.15G080600 Glycine max
Gohir.A02G141500 Gossypium hirsutum
Gohir.D03G052000 Gossypium hirsutum
Gorai.003G054000 Gossypium raimondii
GSVIVG01037378001 Vitis vinifera
HanXRQChr01g0020751 Helianthus annuus
Haze_00396 Corylus avellana
Hma1.2p1_1711F.1_g298680 Hydrangea macrophylla
HPP92_017562 Vanilla planifolia
Hund05844 Selenicereus undatus
Lalb_Chr20g0121321 Lupinus albus
Lj2P827T12 Lonicera japonica
Lj6g0006583 Lotus japonicus
Lsat_1_v5_gn_1_93761 Lactuca sativa
Manes.08G064700 Manihot esculenta
Mapoly0076s0002 Marchantia polymorpha
MBI19_g22663_MAGBIO Magnolia biondii
MCO09G003 Micromonas commoda
MD00G1125800 Malus domestica
MD05G1022700 Malus domestica
MD05G1023000 Malus domestica
MD10G1023900 Malus domestica
Medtr2g015520 Medicago truncatula
MELO3C021887.2 Cucumis melo
Migut.D00701 Erythranthe guttata
MSTRG.18479 Avicennia marina
Nitab4.5_0000428g0030 Nicotiana tabacum
Nitab4.5_0002161g0010 Nicotiana tabacum
Nitab4.5_0002567g0080 Nicotiana tabacum
Nitab4.5_0002915g0060 Nicotiana tabacum
Nn8g41146 Nelumbo nucifera
Oeu025945.2 Olea europaea
Oeu032043.1 Olea europaea
Os05g0569800 Oryza sativa ssp. japonica
Os08g0160000 Oryza sativa ssp. japonica
Peaxi162Scf00050g01910 Petunia axillaris
PGR004G2116 Punica granatum
PGSC0003DMG400022705 Solanum tuberosum
PGSC0003DMG400027389 Solanum tuberosum
Phvul.006G178100 Phaseolus vulgaris
Potri.013G080200 Populus trichocarpa
Potri.013G082900 Populus trichocarpa
Pp3c15_21620 Physcomitrium patens
PRCOL_00001653 Prasinoderma coloniale
Prupe.8G026600 Prunus persica
Prupe.8G026900 Prunus persica
Prupe.8G027200 Prunus persica
Prupe.8G027400 Prunus persica
Psat1g199720 Pisum sativum
PSO063G1868 Papaver somniferum
PSO782G2417 Papaver somniferum
QL09p023193 Quercus lobata
RcHm_v2.0_Chr6g0275831 Rosa chinensis
Rhsim04G0005300 Rhododendron simsii
Rhsim13G0203300 Rhododendron simsii
Sabra13G0072900 Salix brachista
SalBow6G2568 Salvia bowleyana
Sc24g0001580 Simmondsia chinensis
Sed0003176 Sechium edule
SEGI_37847 Sequoiadendron giganteum
SGA_v2.0_scaffold29G12131 Striga asiatica
SHI47253 Sapria himalayana
SHI47254 Sapria himalayana
SHI53994 Sapria himalayana
SMO356G0075 Selaginella moellendorffii
Solyc01g008990.4 Solanum lycopersicum
Solyc11g072180.3 Solanum lycopersicum
Sopen01g004480 Solanum pennellii
Sopen11g029830 Solanum pennellii
Sp3g02010 Schrenkiella parvula
TAR374G0042 Trochodendron aralioides
THA.LOC104820896 Tarenaya hassleriana
Thecc.05G216000 Theobroma cacao
Thhalv10021437m.g Eutrema salsugineum
TPR.G11750 Trifolium pratense
TWI32G1096 Tripterygium wilfordii
TWI60G1377 Tripterygium wilfordii
unitig_62.g23868 Utricularia gibba
unitig_64.g29770 Utricularia gibba
vmacro07270 Vaccinium macrocarpon
VMungo0540G0753 Vigna mungo
Zm00001eb001480 Zea mays
Zm00001eb403820 Zea mays

User provided reference genes

Program Settings