Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18680 Brassica napus
A03p57310 Brassica napus
Aa31LG5G10030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2949 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis
Actinidia07149 Actinidia chinensis
Actinidia24113 Actinidia chinensis
Ah.08g211710 Amaranthus hybridus
AL7G25280 Arabidopsis lyrata
Aqoxy5G02347 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.64W8Q8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6WIU20 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7C35UG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ASHV6T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PZ74PR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SE8XGI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9YDZ2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WS7KG3 Arachis hypogaea
AT4G27490 Arabidopsis thaliana
ATR0048G044 Amborella trichopoda
Atru.chr3.3604 Acer truncatum
AUR62026913 Chenopodium quinoa
AUR62039868 Chenopodium quinoa
AUR62040499 Chenopodium quinoa
BcaC06g32687 Brassica carinata
BolC1t02314H Brassica oleracea
BolC5t29193H Brassica oleracea
BolC7t46030H Brassica oleracea
BraA01t01817Z Brassica rapa
BraA03t14797Z Brassica rapa
C01p23670 Brassica napus
C05p04180 Brassica napus
C07p55510 Brassica napus
CAN.G483.9 Capsicum annuum
CAN.G59.23 Capsicum annuum
CAN.G741.13 Capsicum annuum
CANSAT78G0434 Cannabis sativa
CARHR235170 Cardamine hirsuta
Carub.0007s1336 Capsella rubella
Ca_19285_v3 Cicer arietinum L.
CBR_g26279 Chara braunii
CBR_g4182 Chara braunii
Cc01_g10930 Coffea canephora
CDE03G0292 Ceratophyllum demersum
CDE04G2999 Ceratophyllum demersum
Cfa011300 Carpinus fangiana
Ciclev10029091m.g Citrus clementina
CiPaw.14G084700 Carya illinoinensis
ClCG02G021260 Citrullus lanatus
COL.COLO4_18312 Corchorus olitorius
Cpa.g.sc65.7 Carica papaya
Cre17.g697624 Chlamydomonas reinhardtii
CsaV3_6G014010 Cucumis sativus L.
CSS0048550 Camellia sinensis var. sinensis
Dinv32724 Davidia involucrata
Duzib168G1383 Durio zibethinus
Duzib170G0112 Durio zibethinus
ECA238G0155 Erigeron canadensis
EL10Ac7g16615 Beta vulgaris
Eucgr.J00908 Eucalyptus grandis
FAN11G1125 Fragaria x ananassa
FAN16G1661 Fragaria x ananassa
FAN21G2652 Fragaria x ananassa
FAN25G2587 Fragaria x ananassa
FvH4_1g26690 Fragaria vesca
FvH4_3g31780 Fragaria vesca
Glyma.11G145000 Glycine max
Glyma.12G076900 Glycine max
Gohir.A05G104600 Gossypium hirsutum
Gohir.D05G104400 Gossypium hirsutum
Gorai.009G108600 Gossypium raimondii
GSVIVG01025209001 Vitis vinifera
HanXRQChr14g0452641 Helianthus annuus
Haze_23783 Corylus avellana
HPP92_016484 Vanilla planifolia
HPP92_016497 Vanilla planifolia
Hund01506 Selenicereus undatus
Lalb_Chr01g0004391 Lupinus albus
Lalb_Chr03g0027481 Lupinus albus
Lj3g0007277 Lotus japonicus
Lsat_1_v5_gn_2_98721 Lactuca sativa
Manes.04G018600 Manihot esculenta
Mapoly0055s0093 Marchantia polymorpha
MBI10_g39178_MAGBIO Magnolia biondii
MCO07G684 Micromonas commoda
MD02G1274400 Malus domestica
MD03G1120700 Malus domestica
MD09G1244800 Malus domestica
MD11G1139300 Malus domestica
Medtr4g058720 Medicago truncatula
MELO3C025782.2 Cucumis melo
Migut.D02241 Erythranthe guttata
MSTRG.18672 Avicennia marina
Nitab4.5_0000181g0160 Nicotiana tabacum
Nitab4.5_0003747g0010 Nicotiana tabacum
Nn2g10829 Nelumbo nucifera
Os03g0844450 Oryza sativa ssp. japonica
Os08g0116800 Oryza sativa ssp. japonica
Peaxi162Scf00858g00217 Petunia axillaris
PGR119G0190 Punica granatum
PGSC0003DMG400020831 Solanum tuberosum
Phvul.011G080900 Phaseolus vulgaris
Potri.004G212500 Populus trichocarpa
Potri.009G010600 Populus trichocarpa
Pp3c3_18310 Physcomitrium patens
PRCOL_00002486 Prasinoderma coloniale
Prupe.6G104100 Prunus persica
Prupe.6G104200 Prunus persica
Psat7g192080 Pisum sativum
PSO339G2625 Papaver somniferum
PSO339G6554 Papaver somniferum
PSO801G0513 Papaver somniferum
QL01p021518 Quercus lobata
RcHm_v2.0_Chr1g0317781 Rosa chinensis
RcHm_v2.0_Chr1g0339161 Rosa chinensis
RcHm_v2.0_Chr1g0339171 Rosa chinensis
RcHm_v2.0_Chr1g0339211 Rosa chinensis
RcHm_v2.0_Chr1g0339271 Rosa chinensis
RcHm_v2.0_Chr2g0168941 Rosa chinensis
RcHm_v2.0_Chr5g0058571 Rosa chinensis
Rhsim13G0095800 Rhododendron simsii
Sabra04G0143600 Salix brachista
Sabra09G0006500 Salix brachista
SalBow3G0979 Salvia bowleyana
Sc20g0002840 Simmondsia chinensis
Sed0016947 Sechium edule
SEGI_15627 Sequoiadendron giganteum
SGA_v2.0_scaffold180G39644 Striga asiatica
SHI32600 Sapria himalayana
SMO358G0168 Selaginella moellendorffii
Solyc06g005860.3 Solanum lycopersicum
Sopen06g001830 Solanum pennellii
Sp7g25430 Schrenkiella parvula
TAR369G0123 Trochodendron aralioides
THA.LOC104826376 Tarenaya hassleriana
Thecc.09G343300 Theobroma cacao
Thhalv10026036m.g Eutrema salsugineum
TPR.G10725 Trifolium pratense
TPR.G6155 Trifolium pratense
TPR.G7201 Trifolium pratense
TWI31G1055 Tripterygium wilfordii
TWI79G1101 Tripterygium wilfordii
unitig_747.g21986 Utricularia gibba
vmacro03211 Vaccinium macrocarpon
VMungo1127G1275 Vigna mungo
Zm00001eb328370 Zea mays

User provided reference genes

Program Settings