Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p20290 Brassica napus
Aa31LG2G13100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.270 Anthoceros agrestis
Actinidia07581 Actinidia chinensis
Ah.09g237250 Amaranthus hybridus
AL7G37700 Arabidopsis lyrata
Aqoxy3G01794 Aquilegia oxysepala
Aqoxy3G01796 Aquilegia oxysepala
Aqoxy3G01806 Aquilegia oxysepala
Aqoxy7G02591 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AUX6FS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MC3R28 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q8E5AY Arachis hypogaea
AT4G17020 Arabidopsis thaliana
ATR0680G123 Amborella trichopoda
Atru.chr10.1909 Acer truncatum
AUR62014801 Chenopodium quinoa
AUR62016992 Chenopodium quinoa
BcaC09g50435 Brassica carinata
BcaNung00134 Brassica carinata
BolC1t02496H Brassica oleracea
BraA01t01956Z Brassica rapa
C01p25440 Brassica napus
CAN.G1164.12 Capsicum annuum
CANSAT35G1139 Cannabis sativa
CARHR223580 Cardamine hirsuta
Carub.0007s2440 Capsella rubella
Ca_18535_v3 Cicer arietinum L.
CBR_g44575 Chara braunii
CBR_g45762 Chara braunii
Cc01_g06430 Coffea canephora
Cc01_g06820 Coffea canephora
Cc01_g06850 Coffea canephora
CDE01G0218 Ceratophyllum demersum
Ciclev10009035m.g Citrus clementina
CiPaw.09G058200 Carya illinoinensis
ClCG01G022890 Citrullus lanatus
COL.COLO4_31494 Corchorus olitorius
COL.COLO4_32259 Corchorus olitorius
COL.COLO4_32260 Corchorus olitorius
Cpa.g.sc27.58 Carica papaya
Cre09.g403300 Chlamydomonas reinhardtii
CsaV3_6G050060 Cucumis sativus L.
CSS0027379 Camellia sinensis var. sinensis
DCAR_028090 Daucus carota
Dinv07544 Davidia involucrata
Dinv40543 Davidia involucrata
Duzib192G0974 Durio zibethinus
Duzib209G0004 Durio zibethinus
Duzib235G1364 Durio zibethinus
ECA234G2003 Erigeron canadensis
EL10Ac8g20363 Beta vulgaris
Eucgr.E03123 Eucalyptus grandis
Eucgr.E03323 Eucalyptus grandis
FAN08G2831 Fragaria x ananassa
FAN11G1346 Fragaria x ananassa
FAN11G1498 Fragaria x ananassa
FAN16G0038 Fragaria x ananassa
FAN16G1787 Fragaria x ananassa
FAN21G0237 Fragaria x ananassa
FvH4_3g09430 Fragaria vesca
FvH4_5g20991 Fragaria vesca
Glyma.07G195500 Glycine max
Glyma.13G152440 Glycine max
Glyma.13G152508 Glycine max
Glyma.13G180800 Glycine max
Gohir.A04G102400 Gossypium hirsutum
Gohir.A10G024700 Gossypium hirsutum
Gohir.D06G130832 Gossypium hirsutum
Gohir.D09G038350 Gossypium hirsutum
Gohir.D10G025400 Gossypium hirsutum
Gohir.D10G060133 Gossypium hirsutum
Gorai.006G108000 Gossypium raimondii
Gorai.011G026700 Gossypium raimondii
GSVIVG01002018001 Vitis vinifera
GSVIVG01002931001 Vitis vinifera
HanXRQChr17g0560221 Helianthus annuus
Haze_05744 Corylus avellana
Haze_06488 Corylus avellana
HPP92_021892 Vanilla planifolia
Hund21233 Selenicereus undatus
Lalb_Chr16g0383691 Lupinus albus
Lj4g0017402 Lotus japonicus
Lj7A690T49 Lonicera japonica
Lsat_1_v5_gn_4_52761 Lactuca sativa
Manes.17G044000 Manihot esculenta
Mapoly0047s0044 Marchantia polymorpha
MBI18_g17000_MAGBIO Magnolia biondii
MCO15G365 Micromonas commoda
MD05G1314300 Malus domestica
MD10G1295600 Malus domestica
Medtr3g072660 Medicago truncatula
Medtr4g088935 Medicago truncatula
MELO3C007290.2 Cucumis melo
Migut.G00672 Erythranthe guttata
MSTRG.2567 Avicennia marina
Nitab4.5_0000119g0020 Nicotiana tabacum
Nitab4.5_0002158g0040 Nicotiana tabacum
Nitab4.5_0005954g0050 Nicotiana tabacum
Nn1g06591 Nelumbo nucifera
Oeu017728.1 Olea europaea
Os04g0680000 Oryza sativa ssp. japonica
Peaxi162Scf00736g00425 Petunia axillaris
PGR142G2026 Punica granatum
PGSC0003DMG400022441 Solanum tuberosum
Phvul.002G227900 Phaseolus vulgaris
Potri.004G041600 Populus trichocarpa
Pp3c3_5470 Physcomitrium patens
PRCOL_00001787 Prasinoderma coloniale
Prupe.4G044800 Prunus persica
Psat7g112680 Pisum sativum
PSO210G7403 Papaver somniferum
PSO832G2562 Papaver somniferum
QL05p039825 Quercus lobata
RcHm_v2.0_Chr5g0008121 Rosa chinensis
Rhsim02G0128000 Rhododendron simsii
Rhsim06G0079100 Rhododendron simsii
Rhsim10G0081000 Rhododendron simsii
RhsimUnG0054100 Rhododendron simsii
Sabra04G0025700 Salix brachista
SalBow3G0169 Salvia bowleyana
Sc17g0006240 Simmondsia chinensis
Sed0003361 Sechium edule
SEGI_03475 Sequoiadendron giganteum
SEGI_13032 Sequoiadendron giganteum
SEGI_14594 Sequoiadendron giganteum
SEGI_19813 Sequoiadendron giganteum
SEGI_28984 Sequoiadendron giganteum
SEGI_32979 Sequoiadendron giganteum
SEGI_34698 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31518 Striga asiatica
SHI01874 Sapria himalayana
SMO271G0092 Selaginella moellendorffii
SMO308G0036 Selaginella moellendorffii
Solyc02g078440.3 Solanum lycopersicum
Sopen02g023290 Solanum pennellii
Sp7g17170 Schrenkiella parvula
TAR627G0710 Trochodendron aralioides
THA.LOC104814462 Tarenaya hassleriana
Thecc.06G189900 Theobroma cacao
Thhalv10025179m.g Eutrema salsugineum
TPR.G12033 Trifolium pratense
TWI38G1357 Tripterygium wilfordii
unitig_736.g22566 Utricularia gibba
vmacro15900 Vaccinium macrocarpon
VMungo0647G1277 Vigna mungo
Zm00001eb065950 Zea mays

User provided reference genes

Program Settings