Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p49430 Brassica napus
Aa31LG2G11590 Aethionema arabicum
Actinidia05972 Actinidia chinensis
Actinidia36135 Actinidia chinensis
Ah.15g098720 Amaranthus hybridus
AL5G37860 Arabidopsis lyrata
Aqoxy5G03675 Aquilegia oxysepala
Aqoxy7G00744 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NBA2EB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NQR6QW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XI631Y Arachis hypogaea
AT3G56510 Arabidopsis thaliana
ATR1136G111 Amborella trichopoda
Atru.chr6.2443 Acer truncatum
AUR62029179 Chenopodium quinoa
BcaB02g08365 Brassica carinata
BcaC02g09844 Brassica carinata
BcaC07g39962 Brassica carinata
BcaNung07083 Brassica carinata
BcaNung07365 Brassica carinata
BolC2t09028H Brassica oleracea
BolC4t25202H Brassica oleracea
BolC8t50800H Brassica oleracea
BolC9t58117H Brassica oleracea
BraA09t40396Z Brassica rapa
C04p35970 Brassica napus
C05p10570 Brassica napus
C06p46790 Brassica napus
C08p31790 Brassica napus
C09p52510 Brassica napus
CANSAT64G1390 Cannabis sativa
CANSAT64G2170 Cannabis sativa
CARHR166630 Cardamine hirsuta
Carub.0005s2328 Capsella rubella
Ca_04381_v3 Cicer arietinum L.
CBR_g229 Chara braunii
Cc00_g04470 Coffea canephora
Cc02_g24380 Coffea canephora
CDE02G1254 Ceratophyllum demersum
CDE09G0918 Ceratophyllum demersum
Ciclev10015979m.g Citrus clementina
Ciclev10017686m.g Citrus clementina
CiPaw.03G046700 Carya illinoinensis
ClCG09G019430 Citrullus lanatus
COL.COLO4_29189 Corchorus olitorius
Cpa.g.sc130.68 Carica papaya
Cre06.g264500 Chlamydomonas reinhardtii
CsaV3_5G026950 Cucumis sativus L.
CSS0015220 Camellia sinensis var. sinensis
DCAR_001396 Daucus carota
DCAR_011267 Daucus carota
Dinv22813 Davidia involucrata
Duzib147G1185 Durio zibethinus
ECA236G2300 Erigeron canadensis
EL10Ac6g15396 Beta vulgaris
FAN02G1545 Fragaria x ananassa
FAN05G1017 Fragaria x ananassa
FAN09G0922 Fragaria x ananassa
FAN14G4588 Fragaria x ananassa
FvH4_6g52000 Fragaria vesca
Glyma.05G115100 Glycine max
Glyma.19G052200 Glycine max
Gohir.A07G224400 Gossypium hirsutum
Gohir.D07G231700 Gossypium hirsutum
Gorai.001G266900 Gossypium raimondii
GSVIVG01008659001 Vitis vinifera
HanXRQChr04g0122711 Helianthus annuus
Haze_14769 Corylus avellana
Hma1.2p1_0587F.1_g183900 Hydrangea macrophylla
HPP92_010645 Vanilla planifolia
HPP92_010722 Vanilla planifolia
Lalb_Chr06g0174471 Lupinus albus
Lj4g0026117 Lotus japonicus
Lj7A602T41 Lonicera japonica
Lsat_1_v5_gn_7_9521 Lactuca sativa
Manes.15G152700 Manihot esculenta
Manes.17G110201 Manihot esculenta
Mapoly0020s0128 Marchantia polymorpha
MCO13G391 Micromonas commoda
MD09G1021000 Malus domestica
MD09G1021200 Malus domestica
MD17G1021200 Malus domestica
Medtr6g021760 Medicago truncatula
MELO3C021598.2 Cucumis melo
Migut.H00031 Erythranthe guttata
Nitab4.5_0001357g0120 Nicotiana tabacum
Nitab4.5_0001562g0080 Nicotiana tabacum
Nitab4.5_0006478g0030 Nicotiana tabacum
Nitab4.5_0006683g0110 Nicotiana tabacum
Nn2g12382 Nelumbo nucifera
Oeu013966.1 Olea europaea
Oeu060752.1 Olea europaea
Os05g0129400 Oryza sativa ssp. japonica
Os07g0662600 Oryza sativa ssp. japonica
Peaxi162Scf00420g00135 Petunia axillaris
PGR142G2056 Punica granatum
PGSC0003DMG400010550 Solanum tuberosum
PGSC0003DMG400018652 Solanum tuberosum
PGSC0003DMG400021851 Solanum tuberosum
Phvul.004G060300 Phaseolus vulgaris
Potri.001G341300 Populus trichocarpa
Pp3c15_21890 Physcomitrium patens
PRCOL_00000286 Prasinoderma coloniale
Prupe.3G295300 Prunus persica
Psat1g081640 Pisum sativum
Psat5g064920 Pisum sativum
PSO063G5784 Papaver somniferum
PSO210G1672 Papaver somniferum
PSO210G5838 Papaver somniferum
PSO754G0075 Papaver somniferum
PSO782G2229 Papaver somniferum
QL02p073814 Quercus lobata
RcHm_v2.0_Chr2g0173471 Rosa chinensis
RhsimUnG0006300 Rhododendron simsii
RhsimUnG0087300 Rhododendron simsii
Sabra16G0221300 Salix brachista
SalBow4G2808 Salvia bowleyana
SalBow8G2200 Salvia bowleyana
Sc09g0007140 Simmondsia chinensis
Sc14g0003070 Simmondsia chinensis
Sed0009105 Sechium edule
Sed0009164 Sechium edule
SEGI_26999 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08253 Striga asiatica
SHI10481 Sapria himalayana
SMO235G0038 Selaginella moellendorffii
SMO347G0658 Selaginella moellendorffii
Solyc01g112010.3 Solanum lycopersicum
Solyc10g008130.3 Solanum lycopersicum
Sopen01g054060 Solanum pennellii
Sopen10g004000 Solanum pennellii
Sp5g06120 Schrenkiella parvula
SpUn0056_0040 Schrenkiella parvula
SpUn0233_0020 Schrenkiella parvula
TAR371G0548 Trochodendron aralioides
TAR629G0436 Trochodendron aralioides
TAR629G1146 Trochodendron aralioides
THA.LOC104820717 Tarenaya hassleriana
Thecc.04G021300 Theobroma cacao
Thhalv10006186m.g Eutrema salsugineum
TWI34G1487 Tripterygium wilfordii
TWI63G0383 Tripterygium wilfordii
TWI73G1260 Tripterygium wilfordii
unitig_748.g6973 Utricularia gibba
vmacro05886 Vaccinium macrocarpon
VMungo0464G1582 Vigna mungo
Zm00001eb110920 Zea mays

User provided reference genes

Program Settings