Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p24990 Brassica napus
Aa31LG2G13680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3587 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4817 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5411 Anthoceros agrestis
Actinidia25983 Actinidia chinensis
Aqoxy3G02230 Aquilegia oxysepala
Aqoxy3G02236 Aquilegia oxysepala
Aqoxy3G02237 Aquilegia oxysepala
Aqoxy3G02374 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7UXP3N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U5ZP0C Arachis hypogaea
AT1G32340 Arabidopsis thaliana
ATR0829G033 Amborella trichopoda
ATR0829G096 Amborella trichopoda
Atru.chr6.1624 Acer truncatum
AUR62007316 Chenopodium quinoa
AUR62018689 Chenopodium quinoa
BcaB03g13744 Brassica carinata
BcaC05g27877 Brassica carinata
BolC5t32623H Brassica oleracea
BraA05t21382Z Brassica rapa
C05p38840 Brassica napus
CAN.G1522.10 Capsicum annuum
CAN.G1522.5 Capsicum annuum
CAN.G1522.6 Capsicum annuum
CAN.G1522.7 Capsicum annuum
CANSAT21G2346 Cannabis sativa
CARHR031710 Cardamine hirsuta
CARHR103750 Cardamine hirsuta
Carub.0001s3071 Capsella rubella
Carub.0245s0001 Capsella rubella
Ca_08154_v3 Cicer arietinum L.
CBR_g37671 Chara braunii
CBR_g40898 Chara braunii
Cc08_g03170 Coffea canephora
Cfa012482 Carpinus fangiana
Cfa023405 Carpinus fangiana
Ciclev10011251m.g Citrus clementina
Ciclev10013841m.g Citrus clementina
CiPaw.12G066500 Carya illinoinensis
ClCG09G011740 Citrullus lanatus
COL.COLO4_16974 Corchorus olitorius
Cpa.g.sc90.18 Carica papaya
Cpa.g.sc90.19 Carica papaya
Cre01.g018900 Chlamydomonas reinhardtii
CsaV3_3G048940 Cucumis sativus L.
CSS0033528 Camellia sinensis var. sinensis
DCAR_021701 Daucus carota
DCAR_032084 Daucus carota
Dinv28982 Davidia involucrata
Duzib068G0767 Durio zibethinus
ECA246G3826 Erigeron canadensis
EL10Ac5g12057 Beta vulgaris
Eucgr.E00258 Eucalyptus grandis
FAN08G0094 Fragaria x ananassa
FAN08G2980 Fragaria x ananassa
FAN18G0071 Fragaria x ananassa
FAN18G0203 Fragaria x ananassa
FvH4_5g22580 Fragaria vesca
Glyma.01G016200 Glycine max
Glyma.01G016300 Glycine max
Glyma.09G206500 Glycine max
Gohir.A12G207300 Gossypium hirsutum
Gohir.D12G209700 Gossypium hirsutum
Gorai.008G225300 Gossypium raimondii
GSVIVG01013115001 Vitis vinifera
HanXRQChr17g0538221 Helianthus annuus
HanXRQChr17g0538241 Helianthus annuus
HanXRQChr17g0538251 Helianthus annuus
Haze_08183 Corylus avellana
Hma1.2p1_0303F.1_g118810 Hydrangea macrophylla
Hma1.2p1_0303F.1_g118820 Hydrangea macrophylla
HPP92_025674 Vanilla planifolia
Hund14353 Selenicereus undatus
Lalb_Chr05g0215861 Lupinus albus
Lj2A235G62 Lonicera japonica
Lj2g0005503 Lotus japonicus
Lj2g0014595 Lotus japonicus
Lsat_1_v5_gn_3_18960 Lactuca sativa
Lsat_1_v5_gn_3_19020 Lactuca sativa
Manes.17G009400 Manihot esculenta
Mapoly0070s0049 Marchantia polymorpha
Mapoly0124s0022 Marchantia polymorpha
MCO03G532 Micromonas commoda
MCO11G741 Micromonas commoda
MD06G1037600 Malus domestica
Medtr5g029700 Medicago truncatula
MELO3C003429.2 Cucumis melo
Migut.A01080 Erythranthe guttata
MSTRG.12173 Avicennia marina
Nitab4.5_0000556g0080 Nicotiana tabacum
Nitab4.5_0010978g0020 Nicotiana tabacum
Nn3g19421 Nelumbo nucifera
Oeu028876.1 Olea europaea
Os02g0694700 Oryza sativa ssp. japonica
Os04g0593600 Oryza sativa ssp. japonica
Os04g0593700 Oryza sativa ssp. japonica
Os04g0593800 Oryza sativa ssp. japonica
Peaxi162Scf00045g00139 Petunia axillaris
PGSC0003DMG400017847 Solanum tuberosum
Phvul.002G138550 Phaseolus vulgaris
Phvul.002G138700 Phaseolus vulgaris
Potri.001G139400 Populus trichocarpa
Pp3c6_18080 Physcomitrium patens
Prupe.5G031400 Prunus persica
Psat2g137720 Pisum sativum
PSO063G6878 Papaver somniferum
PSO104G0015 Papaver somniferum
PSO104G0071 Papaver somniferum
PSO104G0107 Papaver somniferum
PSO104G0167 Papaver somniferum
PSO384G4548 Papaver somniferum
PSO729G0276 Papaver somniferum
PSO782G1926 Papaver somniferum
PSO782G4765 Papaver somniferum
QL12p004468 Quercus lobata
RcHm_v2.0_Chr7g0210351 Rosa chinensis
Rhsim11G0018800 Rhododendron simsii
Sabra01G0108400 Salix brachista
Sabra15G0076800 Salix brachista
SalBow6G4293 Salvia bowleyana
Sc22g0001670 Simmondsia chinensis
Sed0025660 Sechium edule
SEGI_40920 Sequoiadendron giganteum
SGA_v2.0_scaffold198G41083 Striga asiatica
SGA_v2.0_scaffold36G14307 Striga asiatica
SMO008G0001 Selaginella moellendorffii
SMO111G0141 Selaginella moellendorffii
SMO358G0265 Selaginella moellendorffii
Solyc08g005150.3 Solanum lycopersicum
Sopen08g001160 Solanum pennellii
Sp1g28560 Schrenkiella parvula
TAR629G0481 Trochodendron aralioides
TAR629G1702 Trochodendron aralioides
TAR636G2380 Trochodendron aralioides
THA.LOC104814425 Tarenaya hassleriana
Thecc.03G306700 Theobroma cacao
Thhalv10007022m.g Eutrema salsugineum
TPR.G18487 Trifolium pratense
TPR.G26369 Trifolium pratense
TPR.G8110 Trifolium pratense
TPR.G8112 Trifolium pratense
TWI60G0579 Tripterygium wilfordii
unitig_32.g11504 Utricularia gibba
VMungo1215G2298 Vigna mungo
Zm00001eb072220 Zea mays
Zm00001eb251320 Zea mays

User provided reference genes

Program Settings