Gene: Sopen08g001160

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g001160
  • Transcript Identifier Sopen08g001160.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 120531-127127 : positive

Gene Family Information

  • ID HOM05D005025
  • #Genes/#Species 148/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g001160.1

Descriptions

  • Description Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression is not detected under normal conditions and in response to cucumber mosaic virus or spermine. | NDR1/HIN1-like 8 (NHL8) | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like , Zinc finger, RING-type, conserved site , Zinc finger, C6HC-type , Zinc finger, RING-type , RWD | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
InterProprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004842
IEA
InterProubiquitin-protein transferase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
IPR006575 RWD domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR002867 IBR domain
IPR031127 E3 ubiquitin ligase RBR family
IPR001841 Zinc finger, RING-type
Mapman id Description
19.2.2.1.4.4.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.E3 ubiquitin ligase (ARA54)