Gene: PGSC0003DMG400017847

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400017847
  • Transcript Identifier PGSC0003DMT400046003
  • Gene Type Coding gene
  • Location ST4.03ch08 : 4168877-4176721 : negative

Gene Family Information

  • ID HOM05D005025
  • #Genes/#Species 148/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37469068
  • id PGSC0003DMG400017847.v4.03
  • uniprot M1BII4

Descriptions

  • Description Ring finger protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0006511
IBA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0032436
IBA
GOA Databasepositive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209
IBA
GOA Databaseprotein polyubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0061630
IBA
GOA Databaseubiquitin protein ligase activity
GO:0031624
IBA
GOA Databaseubiquitin conjugating enzyme binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000151
IBA
GOA Databaseubiquitin ligase complex
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002867 IBR domain
IPR006575 RWD domain
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001841 Zinc finger, RING-type
IPR031127 E3 ubiquitin ligase RBR family
Mapman id Description
19.2.2.1.4.4.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.E3 ubiquitin ligase (ARA54)