Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p05360 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_344.774 Anthoceros agrestis
Actinidia03321 Actinidia chinensis
Ah.04g160380 Amaranthus hybridus
AL6G39410 Arabidopsis lyrata
Aqoxy5G00653 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.16ZACY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IT2BBU Arachis hypogaea
AT5G27620 Arabidopsis thaliana
ATR0053G060 Amborella trichopoda
AUR62000803 Chenopodium quinoa
AUR62005165 Chenopodium quinoa
BcaB04g19682 Brassica carinata
BolC7t44626H Brassica oleracea
BolC9t53511H Brassica oleracea
BolC9t57930H Brassica oleracea
BolC9t57931H Brassica oleracea
BraA09t36174Z Brassica rapa
C09p05840 Brassica napus
CAN.G1034.54 Capsicum annuum
CANSAT54G1439 Cannabis sativa
CARHR186150 Cardamine hirsuta
Carub.0006s2497 Capsella rubella
Ca_10118_v3 Cicer arietinum L.
Ca_21251_v3 Cicer arietinum L.
CBR_g29551 Chara braunii
Cc02_g33260 Coffea canephora
CDE10G0345 Ceratophyllum demersum
CDE10G0550 Ceratophyllum demersum
CDE10G0931 Ceratophyllum demersum
Cfa024551 Carpinus fangiana
Ciclev10001764m.g Citrus clementina
CiPaw.07G019300 Carya illinoinensis
CiPaw.08G163500 Carya illinoinensis
ClCG01G016560 Citrullus lanatus
COL.COLO4_10485 Corchorus olitorius
Cpa.g.sc28.137 Carica papaya
Cre14.g632783 Chlamydomonas reinhardtii
CsaV3_6G042870 Cucumis sativus L.
CSS0007157 Camellia sinensis var. sinensis
CSS0032285 Camellia sinensis var. sinensis
DCAR_002182 Daucus carota
Dinv09444 Davidia involucrata
Duzib177G0724 Durio zibethinus
ECA236G0643 Erigeron canadensis
EL10Ac4g09400 Beta vulgaris
Eucgr.B01853 Eucalyptus grandis
Eucgr.B01941 Eucalyptus grandis
Eucgr.H01039 Eucalyptus grandis
Eucgr.H02201 Eucalyptus grandis
Eucgr.H03488 Eucalyptus grandis
FAN02G4356 Fragaria x ananassa
FAN05G1032 Fragaria x ananassa
FAN09G3795 Fragaria x ananassa
FAN14G2756 Fragaria x ananassa
FvH4_6g06200 Fragaria vesca
Glyma.06G164600 Glycine max
Glyma.17G201300 Glycine max
Gohir.A01G127800 Gossypium hirsutum
Gohir.A04G121400 Gossypium hirsutum
Gohir.A07G065300 Gossypium hirsutum
Gohir.A10G082600 Gossypium hirsutum
Gohir.A11G266100 Gossypium hirsutum
Gohir.A13G041900 Gossypium hirsutum
Gohir.A13G117600 Gossypium hirsutum
Gohir.D01G124500 Gossypium hirsutum
Gohir.D09G110800 Gossypium hirsutum
Gohir.D10G161900 Gossypium hirsutum
Gohir.D10G225900 Gossypium hirsutum
Gohir.D11G276400 Gossypium hirsutum
Gorai.007G298500 Gossypium raimondii
GSVIVG01031086001 Vitis vinifera
HanXRQChr10g0277531 Helianthus annuus
HanXRQChr12g0365431 Helianthus annuus
HanXRQChr12g0385591 Helianthus annuus
HanXRQChr16g0532711 Helianthus annuus
Haze_04172 Corylus avellana
Hma1.2p1_0268F.1_g107630 Hydrangea macrophylla
HPP92_024286 Vanilla planifolia
HPP92_024312 Vanilla planifolia
Hund07082 Selenicereus undatus
Lalb_Chr02g0155631 Lupinus albus
Lj5g0018596 Lotus japonicus
Lsat_1_v5_gn_8_67801 Lactuca sativa
Manes.09G168600 Manihot esculenta
Mapoly0001s0195 Marchantia polymorpha
Mapoly0138s0006 Marchantia polymorpha
MBI16_g23767_MAGBIO Magnolia biondii
MCO06G045 Micromonas commoda
MD04G1203400 Malus domestica
MD04G1203500 Malus domestica
MD12G1217300 Malus domestica
Medtr1g083060 Medicago truncatula
MELO3C007526.2 Cucumis melo
Migut.M00036 Erythranthe guttata
MSTRG.6641 Avicennia marina
Nitab4.5_0002144g0050 Nicotiana tabacum
Nitab4.5_0002344g0160 Nicotiana tabacum
Nitab4.5_0003830g0020 Nicotiana tabacum
Nn4g24543 Nelumbo nucifera
Oeu012104.3 Olea europaea
Os03g0737600 Oryza sativa ssp. japonica
Peaxi162Scf00235g00215 Petunia axillaris
PGR102G1806 Punica granatum
PGSC0003DMG400009473 Solanum tuberosum
PGSC0003DMG400024698 Solanum tuberosum
Phvul.007G179300 Phaseolus vulgaris
Potri.005G027700 Populus trichocarpa
Pp3c27_2950 Physcomitrium patens
Pp3c5_10610 Physcomitrium patens
PRCOL_00002163 Prasinoderma coloniale
Prupe.2G191000 Prunus persica
Prupe.6G323600 Prunus persica
Psat0s2745g0160 Pisum sativum
Psat0s2745g0240 Pisum sativum
PSO170G0092 Papaver somniferum
PSO541G5136 Papaver somniferum
PSO675G5142 Papaver somniferum
QL03p007589 Quercus lobata
QL03p007603 Quercus lobata
QL03p012886 Quercus lobata
RcHm_v2.0_Chr3g0455221 Rosa chinensis
RcHm_v2.0_Chr7g0227161 Rosa chinensis
Rhsim05G0222800 Rhododendron simsii
Sabra05G0033200 Salix brachista
SalBow7G0803 Salvia bowleyana
Sc09g0003080 Simmondsia chinensis
Sed0001919 Sechium edule
SEGI_03068 Sequoiadendron giganteum
SGA_v2.0_scaffold73G24502 Striga asiatica
SHI00439 Sapria himalayana
SMO367G1055 Selaginella moellendorffii
Solyc01g099310.4 Solanum lycopersicum
Solyc04g072880.3 Solanum lycopersicum
Sopen01g042860 Solanum pennellii
Sopen04g029030 Solanum pennellii
Sp2g20780 Schrenkiella parvula
TAR633G2288 Trochodendron aralioides
THA.LOC104818706 Tarenaya hassleriana
THA.LOC104821717 Tarenaya hassleriana
Thecc.05G310100 Theobroma cacao
Thhalv10004554m.g Eutrema salsugineum
TPR.G6101 Trifolium pratense
TWI18G0619 Tripterygium wilfordii
unitig_899.g15345 Utricularia gibba
vmacro04578 Vaccinium macrocarpon
VMungo0720G0219 Vigna mungo
Zm00001eb056480 Zea mays

User provided reference genes

Program Settings