Gene: Pp3c5_10610

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c5_10610
  • Transcript Identifier Pp3c5_10610V3.4
  • Gene Type Coding gene
  • Location Chr05 : 7629308-7633629 : positive

Gene Family Information

  • ID HOM05D005016
  • #Genes/#Species 148/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c5_10610V3.4
  • pacid 32952716
  • alias Pp1s263_21V6
  • alias Phpat.005G041000
  • alias Phypa_147634
  • uniprot A0A2K1KJ63

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0072593
ISO
PLAZA Integrative Orthologyreactive oxygen species metabolic process AT5G27620
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G27620
GO:0007346
ISO
PLAZA Integrative Orthologyregulation of mitotic cell cycle Solyc01g099310.4
GO:0009637
ISO
PLAZA Integrative Orthologyresponse to blue light AT5G27620
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G27620
GO:0010119
ISO
PLAZA Integrative Orthologyregulation of stomatal movement AT5G27620
GO:1990069
ISO
PLAZA Integrative Orthologystomatal opening AT5G27620
GO:2000070
ISO
PLAZA Integrative Orthologyregulation of response to water deprivation AT5G27620
GO:0006357
IBA
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin Solyc04g072880.3
GO:0000079
IBA
GOA Databaseregulation of cyclin-dependent protein serine/threonine kinase activity
GO:0070816
IBA
GOA Databasephosphorylation of RNA polymerase II C-terminal domain

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004672
ISO
PLAZA Integrative Orthologyprotein kinase activity AT5G27620
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G27620
GO:0016538
IBA
IEA
GOA Databasecyclin-dependent protein serine/threonine kinase regulator activity
GO:0016538
IEA
InterProcyclin-dependent protein serine/threonine kinase regulator activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G27620
GO:0005634
IBA
GOA Databasenucleus
GO:0070985
IBA
GOA Databasetranscription factor TFIIK complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036915 Cyclin-like superfamily
IPR013763 Cyclin-like
IPR043198 Cyclin/Cyclin-like subunit Ssn8
IPR006671 Cyclin, N-terminal
IPR031658 Cyclin, C-terminal domain 2
Mapman id Description
13.1.1.1.5 Cell cycle organisation.cell cycle control.cyclin-dependent regulation.cyclin activities.cyclin (CYCH)
14.6.3.1.2 DNA damage response.nucleotide excision repair (NER).multi-functional TFIIh complex.CAK kinase module.cyclin subunit
15.3.3.5.2.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIh basal transcription factor complex.CAK kinase module.cyclin component