Gene: Sopen04g029030

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g029030
  • Transcript Identifier Sopen04g029030.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 70539349-70544483 : positive

Gene Family Information

  • ID HOM05D005016
  • #Genes/#Species 148/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g029030.1

Descriptions

  • Description core cell cycle genes | cyclin H, 1 (CYCH, 1) | CONTAINS InterPro DOMAIN/s: Cyclin H , Cyclin-like , Transcription regulator cyclin , Cyclin-related , Cyclin, N-terminal , Cyclin | BEST Arabidopsis thaliana protein match is: Cyclin family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II
GO:2000070
ISO
PLAZA Integrative Orthologyregulation of response to water deprivation AT5G27620
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G27620
GO:0009637
ISO
PLAZA Integrative Orthologyresponse to blue light AT5G27620
GO:0007346
ISO
PLAZA Integrative Orthologyregulation of mitotic cell cycle Solyc04g072880.3
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G27620
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin Solyc04g072880.3
GO:0072593
ISO
PLAZA Integrative Orthologyreactive oxygen species metabolic process AT5G27620
GO:1990069
ISO
PLAZA Integrative Orthologystomatal opening AT5G27620
GO:0010119
ISO
PLAZA Integrative Orthologyregulation of stomatal movement AT5G27620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016538
IEA
InterProcyclin-dependent protein serine/threonine kinase regulator activity
GO:0004672
ISO
PLAZA Integrative Orthologyprotein kinase activity AT5G27620
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G27620

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G27620
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G27620

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031658 Cyclin, C-terminal domain 2
IPR036915 Cyclin-like superfamily
IPR043198 Cyclin/Cyclin-like subunit Ssn8
IPR006671 Cyclin, N-terminal
IPR013763 Cyclin-like
Mapman id Description
13.1.1.1.5 Cell cycle organisation.cell cycle control.cyclin-dependent regulation.cyclin activities.cyclin (CYCH)
14.6.3.1.2 DNA damage response.nucleotide excision repair (NER).multi-functional TFIIh complex.CAK kinase module.cyclin subunit
15.3.3.5.2.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIh basal transcription factor complex.CAK kinase module.cyclin component