Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG5G17090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1017 Anthoceros agrestis
Actinidia22902 Actinidia chinensis
Ah.14g085190 Amaranthus hybridus
AL3G17570 Arabidopsis lyrata
Aqoxy3G00208 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E2QT4D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P2H8QY Arachis hypogaea
AT3G06540 Arabidopsis thaliana
ATR0605G212 Amborella trichopoda
Atru.chr3.136 Acer truncatum
Atru.chr4.1889 Acer truncatum
Atru.chr4.1890 Acer truncatum
AUR62029056 Chenopodium quinoa
AUR62033951 Chenopodium quinoa
BcaC05g29192 Brassica carinata
BcaNung06662 Brassica carinata
BolC5t34132H Brassica oleracea
BolC5t34133H Brassica oleracea
BolC5t34729H Brassica oleracea
BraA05t22870Z Brassica rapa
C05p54640 Brassica napus
C05p54650 Brassica napus
CAN.G1238.6 Capsicum annuum
CANSAT80G0225 Cannabis sativa
CARHR081090 Cardamine hirsuta
Carub.0003s0600 Capsella rubella
Ca_24977_v3 Cicer arietinum L.
Ca_24978_v3 Cicer arietinum L.
CBR_g49718 Chara braunii
Cc07_g11780 Coffea canephora
Cc07_g11790 Coffea canephora
Cc11_g03220 Coffea canephora
CDE06G1258 Ceratophyllum demersum
CDE08G1303 Ceratophyllum demersum
Cfa027043 Carpinus fangiana
Ciclev10025327m.g Citrus clementina
CiPaw.06G030500 Carya illinoinensis
ClCG10G000240 Citrullus lanatus
COL.COLO4_10588 Corchorus olitorius
COL.COLO4_32936 Corchorus olitorius
Cpa.g.sc365.1 Carica papaya
Cre10.g425550 Chlamydomonas reinhardtii
CsaV3_3G000260 Cucumis sativus L.
CSS0004140 Camellia sinensis var. sinensis
CSS0014238 Camellia sinensis var. sinensis
CSS0037388 Camellia sinensis var. sinensis
DCAR_006252 Daucus carota
Dinv08168 Davidia involucrata
Dinv40183 Davidia involucrata
Duzib147G0190 Durio zibethinus
ECA238G4274 Erigeron canadensis
EL10Ac8g19196 Beta vulgaris
Eucgr.I02226 Eucalyptus grandis
FAN26G3465 Fragaria x ananassa
FAN28G2162 Fragaria x ananassa
FvH4_1g10450 Fragaria vesca
Glyma.01G159000 Glycine max
Glyma.11G085700 Glycine max
Gohir.A07G170900 Gossypium hirsutum
Gohir.D07G177700 Gossypium hirsutum
Gorai.001G198800 Gossypium raimondii
GSVIVG01026648001 Vitis vinifera
HanXRQChr14g0442521 Helianthus annuus
Haze_00453 Corylus avellana
Hma1.2p1_0085F.1_g044710 Hydrangea macrophylla
Hma1.2p1_0085F.1_g044730 Hydrangea macrophylla
Hma1.2p1_0300F.1_g118050 Hydrangea macrophylla
HPP92_017799 Vanilla planifolia
Hund03605 Selenicereus undatus
Lalb_Chr09g0324741 Lupinus albus
Lj2g0026862 Lotus japonicus
Lj4C235G2 Lonicera japonica
Lj9P654T38 Lonicera japonica
Lsat_1_v5_gn_2_73361 Lactuca sativa
Manes.01G155100 Manihot esculenta
Mapoly0007s0130 Marchantia polymorpha
MBI01_g31987_MAGBIO Magnolia biondii
MBI15_g00077_MAGBIO Magnolia biondii
MCO16G005 Micromonas commoda
MD02G1117700 Malus domestica
MD10G1065000 Malus domestica
MD15G1232400 Malus domestica
MD17G1057100 Malus domestica
Medtr5g024150 Medicago truncatula
Medtr5g024983 Medicago truncatula
Medtr5g025170 Medicago truncatula
Medtr5g032240 Medicago truncatula
MELO3C000213.2 Cucumis melo
MELO3C013721.2 Cucumis melo
Migut.C00024 Erythranthe guttata
Nitab4.5_0001936g0130 Nicotiana tabacum
Nitab4.5_0006177g0010 Nicotiana tabacum
Nitab4.5_0024681g0010 Nicotiana tabacum
Nn4g22671 Nelumbo nucifera
Oeu012449.1 Olea europaea
Os01g0269100 Oryza sativa ssp. japonica
Peaxi162Scf01051g00140 Petunia axillaris
Peaxi162Scf01051g00141 Petunia axillaris
PGR102G0956 Punica granatum
PGSC0003DMG401001521 Solanum tuberosum
Phvul.002G116400 Phaseolus vulgaris
Potri.005G028900 Populus trichocarpa
Potri.005G030000 Populus trichocarpa
Pp3c12_25630 Physcomitrium patens
PRCOL_00001884 Prasinoderma coloniale
Prupe.6G331900 Prunus persica
Prupe.7G181700 Prunus persica
Psat0s2561g0120 Pisum sativum
Psat0s2561g0200 Pisum sativum
Psat2g149880 Pisum sativum
PSO210G5901 Papaver somniferum
PSO386G0181 Papaver somniferum
PSO724G1376 Papaver somniferum
QL04p012404 Quercus lobata
QL04p012412 Quercus lobata
QL04p013021 Quercus lobata
QL04p013043 Quercus lobata
QL09p035161 Quercus lobata
QL11p005566 Quercus lobata
RcHm_v2.0_Chr2g0097311 Rosa chinensis
Rhsim08G0027300 Rhododendron simsii
Sabra05G0033700 Salix brachista
Sc16g0001670 Simmondsia chinensis
Sed0002359 Sechium edule
SEGI_12272 Sequoiadendron giganteum
SGA_v2.0_scaffold334G49087 Striga asiatica
SGA_v2.0_scaffold376G50298 Striga asiatica
SHI00054 Sapria himalayana
SHI00102 Sapria himalayana
SMO137G0095 Selaginella moellendorffii
Solyc02g082730.3 Solanum lycopersicum
Sopen02g027490 Solanum pennellii
Sp3g05480 Schrenkiella parvula
TAR629G2658 Trochodendron aralioides
THA.LOC104823506 Tarenaya hassleriana
Thecc.01G005900 Theobroma cacao
Thhalv10020408m.g Eutrema salsugineum
TPR.G29310 Trifolium pratense
TPR.G39534 Trifolium pratense
TPR.G39950 Trifolium pratense
TPR.G5176 Trifolium pratense
TWI09G0982 Tripterygium wilfordii
TWI53G2056 Tripterygium wilfordii
unitig_37.g12359 Utricularia gibba
vmacro18463 Vaccinium macrocarpon
VMungo1215G0823 Vigna mungo
Zm00001eb090210 Zea mays
Zm00001eb128670 Zea mays
Zm00001eb243280 Zea mays
Zm00001eb333020 Zea mays

User provided reference genes

Program Settings