Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p29150 Brassica napus
Aa31LG2G10110 Aethionema arabicum
Actinidia01706 Actinidia chinensis
Actinidia08168 Actinidia chinensis
Actinidia27784 Actinidia chinensis
Ah.03g132650 Amaranthus hybridus
AL2G16455 Arabidopsis lyrata
Aqoxy1G03520 Aquilegia oxysepala
Aqoxy3G02990_Aqoxy3G02991 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.24MNAD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QGK7DH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SJZ9IC Arachis hypogaea
AT1G60200 Arabidopsis thaliana
ATR0691G293 Amborella trichopoda
Atru.chr11.2013 Acer truncatum
AUR62005371 Chenopodium quinoa
AUR62014033 Chenopodium quinoa
BcaB04g20256 Brassica carinata
BcaC02g10690 Brassica carinata
BcaC06g31808 Brassica carinata
BcaC09g49418 Brassica carinata
BolC1t03651H Brassica oleracea
BolC4t24137H Brassica oleracea
BraA01t02979Z Brassica rapa
C01p36930 Brassica napus
C04p26690 Brassica napus
C05p51270 Brassica napus
CAN.G376.10 Capsicum annuum
CANSAT01G1467 Cannabis sativa
CARHR052750 Cardamine hirsuta
Carub.0002s0504 Capsella rubella
Ca_04600_v3 Cicer arietinum L.
Cc11_g14610 Coffea canephora
CDE01G0278 Ceratophyllum demersum
CDE01G0488 Ceratophyllum demersum
CDE02G2726 Ceratophyllum demersum
Cfa009139 Carpinus fangiana
Ciclev10030647m.g Citrus clementina
CiPaw.05G150500 Carya illinoinensis
ClCG05G025280 Citrullus lanatus
COL.COLO4_36971 Corchorus olitorius
Cpa.g.sc69.19 Carica papaya
Cre08.g375084 Chlamydomonas reinhardtii
CsaV3_5G031610 Cucumis sativus L.
CSS0025142 Camellia sinensis var. sinensis
DCAR_024143 Daucus carota
DCAR_026543 Daucus carota
Dinv15307 Davidia involucrata
Dinv24864 Davidia involucrata
Duzib248G0479 Durio zibethinus
Duzib251G0436 Durio zibethinus
ECA199G0004 Erigeron canadensis
ECA247G0578 Erigeron canadensis
EL10Ac6g13668 Beta vulgaris
Eucgr.B03347 Eucalyptus grandis
FAN07G2437 Fragaria x ananassa
FAN12G0889 Fragaria x ananassa
FAN12G3868 Fragaria x ananassa
FAN17G2310 Fragaria x ananassa
FAN22G0459 Fragaria x ananassa
FAN22G1569 Fragaria x ananassa
FvH4_4g34570 Fragaria vesca
FvH4_4g34571 Fragaria vesca
Glyma.01G031400 Glycine max
Glyma.02G034300 Glycine max
Gohir.A03G140300 Gossypium hirsutum
Gohir.D02G163000 Gossypium hirsutum
Gorai.005G183000 Gossypium raimondii
GSVIVG01020233001 Vitis vinifera
HanXRQChr12g0383471 Helianthus annuus
Haze_12170 Corylus avellana
Hma1.2p1_0160F.1_g070740 Hydrangea macrophylla
Hma1.2p1_0867F.1_g230230 Hydrangea macrophylla
HPP92_019184 Vanilla planifolia
HPP92_019185 Vanilla planifolia
Hund05991 Selenicereus undatus
Lalb_Chr05g0216911 Lupinus albus
Lalb_Chr05g0216921 Lupinus albus
Lalb_Chr05g0228131 Lupinus albus
Lalb_Chr05g0228141 Lupinus albus
Lalb_Chr16g0392411 Lupinus albus
Lj2g0008447 Lotus japonicus
Lj6A805G39 Lonicera japonica
Lsat_1_v5_gn_1_87780 Lactuca sativa
Lsat_1_v5_gn_4_6981 Lactuca sativa
Lsat_1_v5_gn_5_2020 Lactuca sativa
Lsat_1_v5_gn_6_33360 Lactuca sativa
Manes.13G031000 Manihot esculenta
Mapoly0148s0032 Marchantia polymorpha
MBI15_g36943_MAGBIO Magnolia biondii
MCO16G428 Micromonas commoda
MD13G1091200 Malus domestica
MD16G1091700 Malus domestica
Medtr5g034430 Medicago truncatula
Medtr5g034435 Medicago truncatula
MELO3C012001.2 Cucumis melo
Migut.L01408 Erythranthe guttata
MSTRG.7893 Avicennia marina
Nitab4.5_0000113g0270 Nicotiana tabacum
Nitab4.5_0010954g0010 Nicotiana tabacum
Nn4g22808 Nelumbo nucifera
Oeu055452.2 Olea europaea
Oeu056734.1 Olea europaea
Os08g0416400 Oryza sativa ssp. japonica
Peaxi162Scf00338g00218 Petunia axillaris
PGR102G2017 Punica granatum
PGSC0003DMG400030977 Solanum tuberosum
Phvul.002G071900 Phaseolus vulgaris
Potri.008G147100 Populus trichocarpa
Potri.010G094700 Populus trichocarpa
Pp3c16_19090 Physcomitrium patens
Pp3c25_3310 Physcomitrium patens
PRCOL_00005912 Prasinoderma coloniale
Prupe.1G254700 Prunus persica
Psat2g106600 Pisum sativum
PSO017G6017 Papaver somniferum
PSO063G1237 Papaver somniferum
PSO339G1217 Papaver somniferum
PSO675G2898 Papaver somniferum
PSO832G2005 Papaver somniferum
QL03p061438 Quercus lobata
RcHm_v2.0_Chr4g0443951 Rosa chinensis
Rhsim12G0047400 Rhododendron simsii
Sabra10G0067000 Salix brachista
Sc11g0001220 Simmondsia chinensis
Sed0006362 Sechium edule
SEGI_30430 Sequoiadendron giganteum
SGA_v2.0_scaffold165G38251 Striga asiatica
SHI27198 Sapria himalayana
SMO117G0118 Selaginella moellendorffii
SMO119G0006 Selaginella moellendorffii
SMO351G0499 Selaginella moellendorffii
Solyc05g005620.4 Solanum lycopersicum
Sopen05g001620 Solanum pennellii
Sp2g04470 Schrenkiella parvula
Sp6g02640 Schrenkiella parvula
TAR374G0217 Trochodendron aralioides
TAR622G0484 Trochodendron aralioides
TAR629G1177 Trochodendron aralioides
THA.LOC104819514 Tarenaya hassleriana
THA.LOC104819547 Tarenaya hassleriana
Thecc.02G248000 Theobroma cacao
Thhalv10023242m.g Eutrema salsugineum
TPR.G13590 Trifolium pratense
TWI18G0605 Tripterygium wilfordii
TWI36G0907 Tripterygium wilfordii
TWI75G0297 Tripterygium wilfordii
unitig_27.g25195 Utricularia gibba
vmacro01183 Vaccinium macrocarpon
VMungo1215G2983 Vigna mungo
Zm00001eb042420 Zea mays
Zm00001eb179020 Zea mays

User provided reference genes

Program Settings