Gene: Thecc.02G248000

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.02G248000
  • Transcript Identifier Thecc.02G248000.3
  • Gene Type Coding gene
  • Location Chromosome_2 : 32914857-32920537 : negative

Gene Family Information

  • ID HOM05D004873
  • #Genes/#Species 152/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.02G248000.v2.1
  • pacid 42031697
  • ancestorIdentifier Thecc1EG010310.CGDv1.1

Descriptions

  • Description Splicing factor PWI domain-containing protein / RNA recognition motif-containing protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
ISO
PLAZA Homology (enrichment)mRNA processing HOM05D004873
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT1G60200

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR034268 RBM25, RNA recognition motif
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.2.1.1.5.1 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).accessory protein activities.pre-mRNA splicing factor (RBM25)