Gene: Lsat_1_v5_gn_4_6981

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_4_6981
  • Transcript Identifier Lsat_1_v5_gn_4_6981.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_4 : 10582920-10587765 : negative

Gene Family Information

  • ID HOM05D004873
  • #Genes/#Species 152/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_4_6981.v5
  • pacid 38932133

Descriptions

  • Description K12822 - RNA-binding protein 25 (RBM25, S164)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
InterPromRNA processing
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT1G60200

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR002483 PWI domain
IPR036483 PWI domain superfamily
IPR034268 RBM25, RNA recognition motif
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.2.1.1.5.1 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).accessory protein activities.pre-mRNA splicing factor (RBM25)