Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p40880 Brassica napus
A05p30690 Brassica napus
Aa31LG8G5700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.721 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.805 Anthoceros agrestis
Actinidia00497 Actinidia chinensis
Actinidia22488 Actinidia chinensis
Ah.01g006160 Amaranthus hybridus
AL3G32250 Arabidopsis lyrata
Aqoxy5G01708 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A0G0F1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CRQ4KQ Arachis hypogaea
AT3G18860 Arabidopsis thaliana
ATR0733G059 Amborella trichopoda
Atru.chr5.2935 Acer truncatum
AUR62011360 Chenopodium quinoa
AUR62016701 Chenopodium quinoa
BcaB01g04782 Brassica carinata
BcaB06g25940 Brassica carinata
BcaC01g03670 Brassica carinata
BcaNung06950 Brassica carinata
BolC3t17278H Brassica oleracea
BolC5t33386H Brassica oleracea
BraA03t13246Z Brassica rapa
BraA05t21911Z Brassica rapa
C03p49850 Brassica napus
C05p46570 Brassica napus
CAN.G322.107 Capsicum annuum
CARHR094310 Cardamine hirsuta
CARHR099950 Cardamine hirsuta
CARHR219250 Cardamine hirsuta
Carub.0003s1870 Capsella rubella
Ca_20846_v3 Cicer arietinum L.
CBR_g24445 Chara braunii
Cc02_g17900 Coffea canephora
CDE05G0342 Ceratophyllum demersum
Cfa004975 Carpinus fangiana
Cfa023312 Carpinus fangiana
Ciclev10027868m.g Citrus clementina
CiPaw.05G060900 Carya illinoinensis
ClCG02G005310 Citrullus lanatus
COL.COLO4_32463 Corchorus olitorius
Cpa.g.sc62.108 Carica papaya
Cpa.g.sc62.109 Carica papaya
Cre09.g389912 Chlamydomonas reinhardtii
CsaV3_2G000030 Cucumis sativus L.
CsaV3_6G026350 Cucumis sativus L.
CsaV3_7G010210 Cucumis sativus L.
CSS0003833 Camellia sinensis var. sinensis
CSS0012027 Camellia sinensis var. sinensis
CSS0019785 Camellia sinensis var. sinensis
DCAR_022097 Daucus carota
Dinv23556 Davidia involucrata
Duzib132G0528 Durio zibethinus
ECA240G4701 Erigeron canadensis
EL10Ac9g21762 Beta vulgaris
Eucgr.I01243 Eucalyptus grandis
FAN02G3646 Fragaria x ananassa
FAN15G3513 Fragaria x ananassa
FAN20G2502 Fragaria x ananassa
FAN24G1877 Fragaria x ananassa
FvH4_2g08030 Fragaria vesca
Glyma.01G127800 Glycine max
Glyma.11G120700 Glycine max
Glyma.12G045800 Glycine max
Gohir.A04G117600 Gossypium hirsutum
Gohir.A11G209850 Gossypium hirsutum
Gohir.D04G159300 Gossypium hirsutum
Gohir.D11G213250 Gossypium hirsutum
Gorai.007G229200 Gossypium raimondii
Gorai.012G146700 Gossypium raimondii
GSVIVG01031913001 Vitis vinifera
HanXRQChr08g0216571 Helianthus annuus
Haze_01851 Corylus avellana
Haze_02419 Corylus avellana
Hma1.2p1_0066F.1_g036750 Hydrangea macrophylla
Hma1.2p1_0066F.1_g036770 Hydrangea macrophylla
HPP92_001848 Vanilla planifolia
Hund06220 Selenicereus undatus
Lalb_Chr01g0002741 Lupinus albus
Lalb_Chr03g0025821 Lupinus albus
Lj3g0013592 Lotus japonicus
Lj5A201G28 Lonicera japonica
Lsat_1_v5_gn_3_56800 Lactuca sativa
Lsat_1_v5_gn_9_109321 Lactuca sativa
Lsat_1_v5_gn_9_93780 Lactuca sativa
Manes.17G099000 Manihot esculenta
Mapoly0131s0025 Marchantia polymorpha
MBI16_g13149_MAGBIO Magnolia biondii
MCO13G192 Micromonas commoda
MD10G1082200 Malus domestica
Medtr4g069090 Medicago truncatula
MELO3C018404.2 Cucumis melo
Migut.B00268 Erythranthe guttata
Nitab4.5_0004280g0140 Nicotiana tabacum
Nitab4.5_0004287g0030 Nicotiana tabacum
Nn5g29490 Nelumbo nucifera
Oeu010556.1 Olea europaea
Oeu010560.1 Olea europaea
Os07g0123700 Oryza sativa ssp. japonica
Peaxi162Scf00016g01034 Petunia axillaris
PGR142G0564 Punica granatum
PGSC0003DMG400025184 Solanum tuberosum
Phvul.011G047700 Phaseolus vulgaris
Potri.004G150700 Populus trichocarpa
Potri.009G112184 Populus trichocarpa
Potri.T125104 Populus trichocarpa
Pp3c13_21390 Physcomitrium patens
PRCOL_00000489 Prasinoderma coloniale
Prupe.8G104600 Prunus persica
Psat7g185120 Pisum sativum
PSO170G5490 Papaver somniferum
PSO700G0113 Papaver somniferum
QL07p047567 Quercus lobata
QL11p041479 Quercus lobata
QL11p041511 Quercus lobata
QL11p041742 Quercus lobata
QL11p041806 Quercus lobata
QL11p042075 Quercus lobata
QL11p042321 Quercus lobata
RcHm_v2.0_Chr6g0262551 Rosa chinensis
Rhsim11G0173300 Rhododendron simsii
Rhsim12G0078300 Rhododendron simsii
Sabra04G0100200 Salix brachista
Sabra09G0085600 Salix brachista
SalBow6G1464 Salvia bowleyana
SalBow6G2421 Salvia bowleyana
Sc18g0004710 Simmondsia chinensis
Sed0014712 Sechium edule
SEGI_07035 Sequoiadendron giganteum
SEGI_11122 Sequoiadendron giganteum
SEGI_26304 Sequoiadendron giganteum
SEGI_27412 Sequoiadendron giganteum
SEGI_36377 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20570 Striga asiatica
SHI05426 Sapria himalayana
SHI05427 Sapria himalayana
SHI05434 Sapria himalayana
SMO146G0209 Selaginella moellendorffii
Solyc01g109350.3 Solanum lycopersicum
Sopen01g051540 Solanum pennellii
Sp3g16960 Schrenkiella parvula
TAR376G1072 Trochodendron aralioides
TAR628G0908 Trochodendron aralioides
THA.LOC104798811 Tarenaya hassleriana
Thecc.02G121800 Theobroma cacao
Thecc.09G060700 Theobroma cacao
Thhalv10020129m.g Eutrema salsugineum
TPR.G18928 Trifolium pratense
TPR.G28052 Trifolium pratense
TWI75G0180 Tripterygium wilfordii
unitig_746.g26712 Utricularia gibba
vmacro02143 Vaccinium macrocarpon
VMungo1127G1904 Vigna mungo
Zm00001eb299230 Zea mays

User provided reference genes

Program Settings