Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p04770 Brassica napus
Aa31LG10G5400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4128 Anthoceros agrestis
Actinidia34750 Actinidia chinensis
Actinidia38940 Actinidia chinensis
Ah.07g206800 Amaranthus hybridus
AL1G54960 Arabidopsis lyrata
Aqoxy2G04008 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F9LJYJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WHDV72 Arachis hypogaea
AT1G48360 Arabidopsis thaliana
ATR1145G086 Amborella trichopoda
Atru.BG.162.p Acer truncatum
AUR62021147 Chenopodium quinoa
AUR62031390 Chenopodium quinoa
BcaB04g17436 Brassica carinata
BcaC07g37141 Brassica carinata
BolC8t47324H Brassica oleracea
BraA08t32506Z Brassica rapa
C08p05140 Brassica napus
CAN.G1076.10 Capsicum annuum
CAN.G710.49 Capsicum annuum
CANSAT78G1796 Cannabis sativa
CARHR037970 Cardamine hirsuta
Carub.0001s3748 Capsella rubella
Ca_07125_v3 Cicer arietinum L.
CBR_g39432 Chara braunii
CBR_g7993 Chara braunii
Cc03_g10750 Coffea canephora
Cc03_g10760 Coffea canephora
CDE02G3320 Ceratophyllum demersum
Cfa015247 Carpinus fangiana
Cfa022531 Carpinus fangiana
Ciclev10004261m.g Citrus clementina
CiPaw.01G109700 Carya illinoinensis
ClCG08G000310 Citrullus lanatus
ClCG08G000320 Citrullus lanatus
COL.COLO4_08079 Corchorus olitorius
Cpa.g.sc8.308 Carica papaya
Cre16.g660350 Chlamydomonas reinhardtii
CsaV3_5G040440 Cucumis sativus L.
CSS0002286 Camellia sinensis var. sinensis
CSS0015609 Camellia sinensis var. sinensis
CSS0028447 Camellia sinensis var. sinensis
CSS0043638 Camellia sinensis var. sinensis
CSS0046373 Camellia sinensis var. sinensis
DCAR_023801 Daucus carota
Dinv31047 Davidia involucrata
Dinv31052 Davidia involucrata
Dinv31053 Davidia involucrata
Duzib212G0770 Durio zibethinus
ECA248G0146 Erigeron canadensis
EL10Ac3g05589 Beta vulgaris
EL10Ac3g05590 Beta vulgaris
Eucgr.H00464 Eucalyptus grandis
FAN07G0434 Fragaria x ananassa
FAN12G0062 Fragaria x ananassa
FAN12G0551 Fragaria x ananassa
FAN17G2248 Fragaria x ananassa
FAN22G0233 Fragaria x ananassa
FvH4_4g12370 Fragaria vesca
Glyma.08G259766 Glycine max
Glyma.08G259832 Glycine max
Glyma.16G127800 Glycine max
Glyma.18G283900 Glycine max
Gohir.A03G095900 Gossypium hirsutum
Gohir.D02G113000 Gossypium hirsutum
Gorai.005G127900 Gossypium raimondii
GSVIVG01031656001 Vitis vinifera
HanXRQChr07g0204631 Helianthus annuus
Haze_11712 Corylus avellana
Hma1.2p1_1286F.1_g273220 Hydrangea macrophylla
Hma1.2p1_1286F.1_g273230 Hydrangea macrophylla
HPP92_024254 Vanilla planifolia
HPP92_024268 Vanilla planifolia
Hund11729 Selenicereus undatus
Lalb_Chr10g0092061 Lupinus albus
Lj1g0022138 Lotus japonicus
Lj6A353T82 Lonicera japonica
Lj6A353T83 Lonicera japonica
Lj6A358G53 Lonicera japonica
Lj6C358T14 Lonicera japonica
Lj6P350T22 Lonicera japonica
Lj6P352T60 Lonicera japonica
Lsat_1_v5_gn_1_69581 Lactuca sativa
Manes.05G194701 Manihot esculenta
Mapoly0005s0042 Marchantia polymorpha
MBI11_g12232_MAGBIO Magnolia biondii
MCO01G753 Micromonas commoda
MD00G1163900 Malus domestica
MD09G1250200 Malus domestica
MD09G1250400 Malus domestica
Medtr7g022220 Medicago truncatula
MELO3C022216.2 Cucumis melo
Migut.N00187 Erythranthe guttata
MSTRG.24599 Avicennia marina
Nitab4.5_0007057g0010 Nicotiana tabacum
Nitab4.5_0008073g0020 Nicotiana tabacum
Oeu006039.1 Olea europaea
Os06g0171800 Oryza sativa ssp. japonica
Peaxi162Scf00286g00338 Petunia axillaris
PGR142G4233 Punica granatum
PGSC0003DMG400021624 Solanum tuberosum
Phvul.008G017600 Phaseolus vulgaris
Potri.002G233800 Populus trichocarpa
Pp3c5_2670 Physcomitrium patens
PRCOL_00003987 Prasinoderma coloniale
Prupe.1G176700 Prunus persica
Psat3g188160 Pisum sativum
PSO017G5363 Papaver somniferum
PSO675G2609 Papaver somniferum
QL06p027729 Quercus lobata
RcHm_v2.0_Chr4g0410481 Rosa chinensis
Rhsim02G0071300 Rhododendron simsii
Sabra02G0178500 Salix brachista
SalBow3G0652 Salvia bowleyana
Sc13g0008930 Simmondsia chinensis
Sed0003398 Sechium edule
SEGI_11980 Sequoiadendron giganteum
SEGI_19061 Sequoiadendron giganteum
SGA_v2.0_scaffold550G52871 Striga asiatica
SHI06489 Sapria himalayana
SMO110G0002 Selaginella moellendorffii
SMO110G0004 Selaginella moellendorffii
SMO110G0011 Selaginella moellendorffii
SMO110G0012 Selaginella moellendorffii
SMO203G0018 Selaginella moellendorffii
SMO252G0014 Selaginella moellendorffii
SMO252G0017 Selaginella moellendorffii
SMO327G0004 Selaginella moellendorffii
SMO327G0008 Selaginella moellendorffii
SMO327G0027 Selaginella moellendorffii
SMO331G0063 Selaginella moellendorffii
SMO331G0064 Selaginella moellendorffii
SMO331G0066 Selaginella moellendorffii
SMO331G0087 Selaginella moellendorffii
SMO331G0089 Selaginella moellendorffii
Solyc09g098370.4 Solanum lycopersicum
Sopen09g036290 Solanum pennellii
Sp1g35310 Schrenkiella parvula
TAR365G0018 Trochodendron aralioides
TAR365G0620 Trochodendron aralioides
THA.LOC104805833 Tarenaya hassleriana
Thecc.04G186700 Theobroma cacao
Thhalv10011221m.g Eutrema salsugineum
TPR.G22177 Trifolium pratense
TPR.G2930 Trifolium pratense
TPR.G2943 Trifolium pratense
TWI73G0948 Tripterygium wilfordii
unitig_8.g4743 Utricularia gibba
vmacro15619 Vaccinium macrocarpon
VMungo1383G1195 Vigna mungo
Zm00001eb188730 Zea mays
Zm00001eb188740 Zea mays
Zm00001eb375390 Zea mays

User provided reference genes

Program Settings