Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG5G670 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1481 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2343 Anthoceros agrestis
Actinidia18541 Actinidia chinensis
Ah.05g180290 Amaranthus hybridus
AL6G53230 Arabidopsis lyrata
Aqoxy5G00593 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HL3201 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YM6R3T Arachis hypogaea
AT4G00234 Arabidopsis thaliana
AT4G00290 Arabidopsis thaliana
ATR0661G226 Amborella trichopoda
Atru.chr12.711 Acer truncatum
Atru.chr5.540 Acer truncatum
Atru.ctg942.22 Acer truncatum
AUR62004395 Chenopodium quinoa
AUR62022601 Chenopodium quinoa
BcaB01g02199 Brassica carinata
BcaC03g16035 Brassica carinata
BolC2t09805H Brassica oleracea
CAN.G91.14 Capsicum annuum
CANSAT56G0368 Cannabis sativa
CARHR248350 Cardamine hirsuta
Carub.0006s3698 Capsella rubella
Ca_23597_v3 Cicer arietinum L.
Cc00_g17840 Coffea canephora
CDE04G1515 Ceratophyllum demersum
Ciclev10028150m.g Citrus clementina
CiPaw.01G064900 Carya illinoinensis
ClCG05G001380 Citrullus lanatus
COL.COLO4_12751 Corchorus olitorius
Cpa.g.sc11.45 Carica papaya
Cpa.g.sc11.48 Carica papaya
Cre01.g035600 Chlamydomonas reinhardtii
Cre01.g035750 Chlamydomonas reinhardtii
Cre07.g329300 Chlamydomonas reinhardtii
CsaV3_3G008770 Cucumis sativus L.
CSS0041396 Camellia sinensis var. sinensis
Dinv43847 Davidia involucrata
ECA234G0026 Erigeron canadensis
EL10Ac1g00374 Beta vulgaris
Eucgr.D02313 Eucalyptus grandis
FAN01G2554 Fragaria x ananassa
FAN03G0218 Fragaria x ananassa
FAN06G2758 Fragaria x ananassa
FAN06G3707 Fragaria x ananassa
FAN10G1283 Fragaria x ananassa
FAN10G2784 Fragaria x ananassa
FvH4_7g15010 Fragaria vesca
Glyma.07G067400 Glycine max
Glyma.16G033400 Glycine max
Gohir.A08G032300 Gossypium hirsutum
Gohir.A12G107750 Gossypium hirsutum
Gohir.D08G043200 Gossypium hirsutum
Gohir.D12G111000 Gossypium hirsutum
Gorai.004G041800 Gossypium raimondii
Gorai.008G120200 Gossypium raimondii
GSVIVG01026989001 Vitis vinifera
HanXRQChr09g0268301 Helianthus annuus
HanXRQChr11g0324571 Helianthus annuus
HanXRQChr11g0349701 Helianthus annuus
HanXRQChr13g0416501 Helianthus annuus
HanXRQChr14g0453371 Helianthus annuus
HanXRQChr16g0520681 Helianthus annuus
HanXRQChr17g0534491 Helianthus annuus
Haze_15544 Corylus avellana
Hma1.2p1_0071F.1_g037910 Hydrangea macrophylla
HPP92_025632 Vanilla planifolia
Hund16663 Selenicereus undatus
Lalb_Chr04g0259171 Lupinus albus
Lalb_Chr17g0339181 Lupinus albus
Lj3g0007734 Lotus japonicus
Lj9C587T4 Lonicera japonica
Lsat_1_v5_gn_4_43000 Lactuca sativa
Lsat_1_v5_gn_4_48041 Lactuca sativa
Lsat_1_v5_gn_4_48081 Lactuca sativa
Lsat_1_v5_gn_4_49101 Lactuca sativa
Manes.01G254000 Manihot esculenta
Mapoly0001s0022 Marchantia polymorpha
Mapoly0003s0092 Marchantia polymorpha
MBI01_g45834_MAGBIO Magnolia biondii
MBI09_g26550_MAGBIO Magnolia biondii
MBI18_g40888_MAGBIO Magnolia biondii
MCO05G209 Micromonas commoda
MCO06G240 Micromonas commoda
MCO12G417 Micromonas commoda
MD01G1068400 Malus domestica
Medtr8g028760 Medicago truncatula
Medtr8g030960 Medicago truncatula
Medtr8g031050 Medicago truncatula
Medtr8g031060 Medicago truncatula
Medtr8g070010 Medicago truncatula
MELO3C006094.2 Cucumis melo
Migut.B01027 Erythranthe guttata
Migut.B01028 Erythranthe guttata
Migut.B01788 Erythranthe guttata
Nitab4.5_0000200g0180 Nicotiana tabacum
Nitab4.5_0000690g0060 Nicotiana tabacum
Nn6g33309 Nelumbo nucifera
Oeu015224.1 Olea europaea
Os02g0681000 Oryza sativa ssp. japonica
Os04g0578700 Oryza sativa ssp. japonica
Peaxi162Scf00020g01222 Petunia axillaris
Peaxi162Scf00585g00318 Petunia axillaris
PGR031G2856 Punica granatum
Phvul.010G102400 Phaseolus vulgaris
Potri.002G162100 Populus trichocarpa
Potri.014G088200 Populus trichocarpa
Pp3c10_20950 Physcomitrium patens
Pp3c13_20730 Physcomitrium patens
Pp3c14_810 Physcomitrium patens
Pp3c15_19020 Physcomitrium patens
Pp3c3_12760 Physcomitrium patens
Pp3c9_20120 Physcomitrium patens
Pp3c9_20150 Physcomitrium patens
PRCOL_00006850 Prasinoderma coloniale
Prupe.2G174600 Prunus persica
Psat4g156520 Pisum sativum
PSO063G6595 Papaver somniferum
RcHm_v2.0_Chr1g0357041 Rosa chinensis
Rhsim01G0164800 Rhododendron simsii
Rhsim05G0008500 Rhododendron simsii
Rhsim05G0021600 Rhododendron simsii
Rhsim07G0012400 Rhododendron simsii
Rhsim07G0181500 Rhododendron simsii
Sc06g0007250 Simmondsia chinensis
Sed0023991 Sechium edule
SEGI_13365 Sequoiadendron giganteum
SEGI_23190 Sequoiadendron giganteum
SEGI_38275 Sequoiadendron giganteum
SGA_v2.0_scaffold95G28745 Striga asiatica
SGA_v2.0_scaffold95G28817 Striga asiatica
SHI13401 Sapria himalayana
SMO116G0175 Selaginella moellendorffii
SMO361G0110 Selaginella moellendorffii
SMO361G0690 Selaginella moellendorffii
Solyc10g012050.3 Solanum lycopersicum
Solyc10g012060.3 Solanum lycopersicum
Sopen10g005790 Solanum pennellii
Sopen10g005800 Solanum pennellii
Sp6g00340 Schrenkiella parvula
TAR375G0400 Trochodendron aralioides
TAR626G0135 Trochodendron aralioides
THA.LOC104825856 Tarenaya hassleriana
Thecc.01G355200 Theobroma cacao
Thhalv10028609m.g Eutrema salsugineum
TPR.G14976 Trifolium pratense
TWI59G0961 Tripterygium wilfordii
unitig_26.g9294 Utricularia gibba
unitig_749.g14344 Utricularia gibba
vmacro13252 Vaccinium macrocarpon
vmacro20907 Vaccinium macrocarpon
vmacro20909 Vaccinium macrocarpon
VMungo0331G0696 Vigna mungo
Zm00001eb073200 Zea mays

User provided reference genes

Program Settings