Gene: AT4G00290
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G00290
- Transcript Identifier AT4G00290.1
- Gene Type Coding gene
- Location Chr4 : 123097-125300 : negative
Gene Family Information
- ID HOM05D004707
- #Genes/#Species 155/89
- Phylogenetic origin
- ID ORTHO05D005837
- #Genes/#Species 151/89
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT4G00290.1
- uniprot Q8VZL4
Descriptions
- Description Mechanosensitive ion channel protein
- Computational description Mechanosensitive ion channel protein; INVOLVED IN: transmembrane transport; LOCATED IN: chloroplast, membrane, chloroplast envelope; CONTAINS InterPro DOMAIN/s: Mechanosensitive ion channel MscS, transmembrane-2 (InterPro:IPR011014), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G00234.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0055085 | IEA | GOA Database | transmembrane transport | |
| GO:0055085 | IEA | InterPro | transmembrane transport | |
| GO:0006811 | IEA | GOA Database | ion transport | |
| GO:0034220 | IEA | GOA Database | ion transmembrane transport | |
| GO:0034599 | IMP | Gene Ontology | cellular response to oxidative stress | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008381 | IDA | Gene Ontology | mechanosensitive ion channel activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009941 | IDA | GOA Database | chloroplast envelope | |
| GO:0009941 | HDA | Gene Ontology | chloroplast envelope | 2 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005739 | IDA IEA | GOA Database | mitochondrion | |
| GO:0005739 | HDA | Gene Ontology | mitochondrion | 3 |
| GO:0009507 | IDA | GOA Database | chloroplast | |
| GO:0009507 | HDA | Gene Ontology | chloroplast | 4 |
| GO:0005886 | ISM | Gene Ontology | plasma membrane | |
| GO:0031966 | IEA | GOA Database | mitochondrial membrane | |
| GO:0005743 | IDA | Gene Ontology | mitochondrial inner membrane | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 24.3.5 | Solute transport.channels.mechanosensitive ion channel (MSL) |