Gene: Solyc10g012060.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc10g012060.3
  • Transcript Identifier Solyc10g012060.3.1
  • Gene Type Coding gene
  • Location SL4.0ch10 : 4181241-4195126 : positive

Gene Family Information

  • ID HOM05D004707
  • #Genes/#Species 155/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc10g012060.3.1
  • uniprot A0A3Q7IDA2
  • gene_id Solyc10g012060

Descriptions

  • Description Mechanosensitive ion channel protein 1, mitochondrial (AHRD V3.3 *** A0A2G3BDL8_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0034599
ISO
PLAZA Integrative Orthologycellular response to oxidative stress AT4G00290

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008381
ISO
PLAZA Integrative Orthologymechanosensitive ion channel activity AT4G00290

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G00290
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G00290
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT4G00290
GO:0005743
ISO
PLAZA Integrative Orthologymitochondrial inner membrane AT4G00290

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006685 Mechanosensitive ion channel MscS
IPR010920 LSM domain superfamily
IPR023408 Mechanosensitive ion channel MscS domain superfamily
IPR011014 Mechanosensitive ion channel MscS, transmembrane-2
Mapman id Description
24.3.5 Solute transport.channels.mechanosensitive ion channel (MSL)