Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p17540 Brassica napus
Aa31LG1G14940 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2833 Anthoceros agrestis
Actinidia19204 Actinidia chinensis
Actinidia35628 Actinidia chinensis
AL8G45110 Arabidopsis lyrata
Aqoxy5G01578 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LKR1Y0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SG067W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TV0A1X Arachis hypogaea
AT5G66420 Arabidopsis thaliana
ATR0568G133 Amborella trichopoda
Atru.chr3.652 Acer truncatum
Atru.chr3.653 Acer truncatum
Atru.chr3.699 Acer truncatum
AUR62004091 Chenopodium quinoa
AUR62007603 Chenopodium quinoa
BcaB02g10033 Brassica carinata
BcaC06g34697 Brassica carinata
BolC7t43070H Brassica oleracea
BraA07t29474Z Brassica rapa
C07p25500 Brassica napus
CAN.G1019.6 Capsicum annuum
CANSAT01G1299 Cannabis sativa
CARHR034750 Cardamine hirsuta
Carub.0008s2809 Capsella rubella
Ca_07052_v3 Cicer arietinum L.
Ca_22335_v3 Cicer arietinum L.
Ca_22377_v3 Cicer arietinum L.
Cc07_g09910 Coffea canephora
Cfa006896 Carpinus fangiana
Ciclev10024970m.g Citrus clementina
CiPaw.07G049300 Carya illinoinensis
ClCG01G019830 Citrullus lanatus
COL.COLO4_22029 Corchorus olitorius
COL.COLO4_22030 Corchorus olitorius
Cpa.g.sc6.166 Carica papaya
CsaV3_6G046560 Cucumis sativus L.
CSS0017426 Camellia sinensis var. sinensis
DCAR_017308 Daucus carota
Dinv40019 Davidia involucrata
Dinv40102 Davidia involucrata
Duzib147G1548 Durio zibethinus
Duzib248G0237 Durio zibethinus
Duzib264G1222 Durio zibethinus
ECA232G2544 Erigeron canadensis
ECA234G1590 Erigeron canadensis
EL10As8g23909 Beta vulgaris
Eucgr.I02404 Eucalyptus grandis
FAN14G4531 Fragaria x ananassa
FAN19G2260 Fragaria x ananassa
FAN23G0750 Fragaria x ananassa
FAN23G1600 Fragaria x ananassa
FAN26G2871 Fragaria x ananassa
FAN28G0143 Fragaria x ananassa
FvH4_1g12760 Fragaria vesca
FvH4_1g28681 Fragaria vesca
Glyma.02G053800 Glycine max
Glyma.16G133867 Glycine max
Glyma.16G133933 Glycine max
Gohir.A06G159466 Gossypium hirsutum
Gohir.A11G182300 Gossypium hirsutum
Gohir.A11G182500 Gossypium hirsutum
Gohir.D11G189100 Gossypium hirsutum
Gohir.D11G189150 Gossypium hirsutum
Gorai.007G201200 Gossypium raimondii
Gorai.007G201400 Gossypium raimondii
Gorai.010G192800 Gossypium raimondii
GSVIVG01005333001 Vitis vinifera
GSVIVG01017515001 Vitis vinifera
GSVIVG01018892001 Vitis vinifera
HanXRQChr08g0221331 Helianthus annuus
HanXRQChr09g0261191 Helianthus annuus
Haze_03856 Corylus avellana
HPP92_004908 Vanilla planifolia
Hund16446 Selenicereus undatus
Lalb_Chr16g0391041 Lupinus albus
Lj4A206G17 Lonicera japonica
Lj4C205T11 Lonicera japonica
Lj4g0022194 Lotus japonicus
Lsat_1_v5_gn_4_148020 Lactuca sativa
Manes.02G097100 Manihot esculenta
MD02G1142700 Malus domestica
MD02G1142800 Malus domestica
MD02G1142900 Malus domestica
MD15G1256300 Malus domestica
Medtr8g076950 Medicago truncatula
MELO3C001880.2 Cucumis melo
MELO3C007854.2 Cucumis melo
MELO3C010392.2 Cucumis melo
MELO3C028160.2 Cucumis melo
MELO3C028166.2 Cucumis melo
MELO3C028263.2 Cucumis melo
MELO3C028475.2 Cucumis melo
Migut.H02523 Erythranthe guttata
MSTRG.2485 Avicennia marina
Nitab4.5_0000136g0250 Nicotiana tabacum
Nitab4.5_0001525g0030 Nicotiana tabacum
Nn5g29687 Nelumbo nucifera
Oeu019445.1 Olea europaea
Os06g0472400 Oryza sativa ssp. japonica
Peaxi162Scf00008g03325 Petunia axillaris
PGR119G1113 Punica granatum
PGSC0003DMG400015491 Solanum tuberosum
Phvul.003G256200 Phaseolus vulgaris
Phvul.003G256400 Phaseolus vulgaris
Potri.005G120100 Populus trichocarpa
Potri.007G021000 Populus trichocarpa
Pp3c20_8030 Physcomitrium patens
Prupe.7G158600 Prunus persica
Psat0s3062g0040 Pisum sativum
Psat2g002040 Pisum sativum
Psat4g095640 Pisum sativum
Psat4g095680 Pisum sativum
PSO170G5809 Papaver somniferum
PSO170G6195 Papaver somniferum
PSO407G0425 Papaver somniferum
QL03p066021 Quercus lobata
QL06p035418 Quercus lobata
QL06p035429 Quercus lobata
RcHm_v2.0_Chr2g0100861 Rosa chinensis
Rhsim08G0121400 Rhododendron simsii
Sabra05G0098800 Salix brachista
Sabra07G0018000 Salix brachista
SalBow8G1271 Salvia bowleyana
SalBow8G5199 Salvia bowleyana
Sc16g0002550 Simmondsia chinensis
Sed0001139 Sechium edule
SEGI_19277 Sequoiadendron giganteum
SEGI_40838 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06320 Striga asiatica
SGA_v2.0_scaffold257G45676 Striga asiatica
SGA_v2.0_scaffold48G18033 Striga asiatica
SMO367G0601 Selaginella moellendorffii
Solyc02g062560.3 Solanum lycopersicum
Sopen02g013570 Solanum pennellii
Sp2g30300 Schrenkiella parvula
TAR376G0038 Trochodendron aralioides
TAR376G0549 Trochodendron aralioides
TAR376G0765 Trochodendron aralioides
TAR376G0875 Trochodendron aralioides
TAR376G0961 Trochodendron aralioides
THA.LOC104821303 Tarenaya hassleriana
Thecc.01G030000 Theobroma cacao
Thhalv10003695m.g Eutrema salsugineum
TPR.G21548 Trifolium pratense
TWI09G0339 Tripterygium wilfordii
TWI09G0580 Tripterygium wilfordii
unitig_60.g25534 Utricularia gibba
vmacro19462 Vaccinium macrocarpon
VMungo0251G2099 Vigna mungo
Zm00001eb098830 Zea mays
Zm00001eb124970 Zea mays
Zm00001eb135660 Zea mays
Zm00001eb225760 Zea mays
Zm00001eb334700 Zea mays

User provided reference genes

Program Settings