Gene: Zm00001eb135660

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb135660
  • Transcript Identifier Zm00001eb135660_T001
  • Gene Type Coding gene
  • Location 3 : 120313999-120317794 : positive

Gene Family Information

  • ID HOM05D004674
  • #Genes/#Species 156/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb135660_T001
  • pid Zm00001eb135660_P001
  • uniprot A0A1D6PYH5
  • uniprot A0A1D6PYH7
  • V4_identifier Zm00001d041431
  • V4_identifier Zm00001d041432

Descriptions

  • Description Zm00001e125002
  • Description TIM-barrel signal transduction protein isoform 2
  • Description Nuclear pore complex protein NUP214
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009607
IEA
GOA Databaseresponse to biotic stimulus
GO:0006405
IEA
GOA DatabaseRNA export from nucleus
GO:0006405
IEA
InterProRNA export from nucleus
GO:0006952
IEA
GOA Databasedefense response
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus Solyc02g062560.3
GO:0044830
ISO
PLAZA Integrative Orthologymodulation by host of viral RNA genome replication Solyc02g062560.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017056
IEA
GOA Databasestructural constituent of nuclear pore
GO:0017056
IEA
InterProstructural constituent of nuclear pore
GO:0003824
IEA
InterProcatalytic activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Solyc02g062560.3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009215 TIM-barrel domain, IGPS-like
IPR013785 Aldolase-type TIM barrel
IPR044694 Nuclear pore complex protein NUP214
IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily
Mapman id Description
16.10.3.3 RNA processing.messenger ribonucleoparticle (mRNP) export.mRNP remodeling.regulatory factor (LNO1)
23.5.1.1.7.1 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.nucleoporin (NUP214)