Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p48420 Brassica napus
Aa31LG10G10520 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.842 Anthoceros agrestis
Actinidia13882 Actinidia chinensis
Actinidia29230 Actinidia chinensis
Ah.16g102370 Amaranthus hybridus
AL5G36630 Arabidopsis lyrata
Aqoxy4G02884 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3B46PQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T39EX2 Arachis hypogaea
AT3G55480 Arabidopsis thaliana
ATR0559G310 Amborella trichopoda
Atru.chr12.431 Acer truncatum
AUR62012098 Chenopodium quinoa
AUR62039368 Chenopodium quinoa
BcaB01g00096 Brassica carinata
BcaB02g07686 Brassica carinata
BcaC07g39867 Brassica carinata
BolC8t50690H Brassica oleracea
BraA09t40294Z Brassica rapa
C08p30730 Brassica napus
CAN.G55.6 Capsicum annuum
CANSAT11G1219 Cannabis sativa
CARHR159280 Cardamine hirsuta
CARHR159380 Cardamine hirsuta
CARHR165520 Cardamine hirsuta
CARHR165530 Cardamine hirsuta
Carub.0005s2220 Capsella rubella
Ca_05890_v3 Cicer arietinum L.
CBR_g798 Chara braunii
Cc02_g07730 Coffea canephora
CDE04G1394 Ceratophyllum demersum
Cfa001465 Carpinus fangiana
Cfa025571 Carpinus fangiana
Ciclev10030556m.g Citrus clementina
CiPaw.01G288400 Carya illinoinensis
ClCG07G003410 Citrullus lanatus
COL.COLO4_15058 Corchorus olitorius
Cpa.g.c39208 Carica papaya
Cpa.g.sc1.416 Carica papaya
Cpa.g.sc1.417 Carica papaya
Cre11.g468600 Chlamydomonas reinhardtii
CsaV3_5G008150 Cucumis sativus L.
CSS0013300 Camellia sinensis var. sinensis
CSS0014274 Camellia sinensis var. sinensis
DCAR_027609 Daucus carota
Dinv26026 Davidia involucrata
Duzib114G0300 Durio zibethinus
ECA233G3287 Erigeron canadensis
EL10Ac2g04737 Beta vulgaris
Eucgr.J00002 Eucalyptus grandis
FAN01G0989 Fragaria x ananassa
FAN01G2561 Fragaria x ananassa
FAN03G1996 Fragaria x ananassa
FAN03G2998 Fragaria x ananassa
FAN06G1159 Fragaria x ananassa
FAN06G2378 Fragaria x ananassa
FAN10G1883 Fragaria x ananassa
FvH4_7g22680 Fragaria vesca
Glyma.02G248300 Glycine max
Glyma.14G068200 Glycine max
Gohir.A03G001000 Gossypium hirsutum
Gohir.A05G301800 Gossypium hirsutum
Gohir.A05G349133 Gossypium hirsutum
Gohir.A06G191966 Gossypium hirsutum
Gohir.A09G180700 Gossypium hirsutum
Gohir.D01G079901 Gossypium hirsutum
Gohir.D02G169500 Gossypium hirsutum
Gohir.D04G022200 Gossypium hirsutum
Gohir.D05G257300 Gossypium hirsutum
Gohir.D05G301500 Gossypium hirsutum
Gohir.D06G106900 Gossypium hirsutum
Gohir.D09G156925 Gossypium hirsutum
Gohir.D12G090100 Gossypium hirsutum
Gohir.D13G129000 Gossypium hirsutum
Gorai.003G132900 Gossypium raimondii
Gorai.009G319600 Gossypium raimondii
Gorai.011G069300 Gossypium raimondii
Gorai.012G070900 Gossypium raimondii
Gorai.013G102200 Gossypium raimondii
Gorai.013G167200 Gossypium raimondii
GSVIVG01016531001 Vitis vinifera
HanXRQChr08g0220781 Helianthus annuus
Haze_17077 Corylus avellana
HPP92_001680 Vanilla planifolia
Hund13770 Selenicereus undatus
Lalb_Chr04g0251191 Lupinus albus
Lj8C83G8 Lonicera japonica
Lj8C83T9 Lonicera japonica
LjContig00141g0003376 Lotus japonicus
Lsat_1_v5_gn_8_15420 Lactuca sativa
Manes.04G070300 Manihot esculenta
Mapoly0053s0031 Marchantia polymorpha
MBI14_g37190_MAGBIO Magnolia biondii
MBI14_g45259_MAGBIO Magnolia biondii
MCO02G444 Micromonas commoda
MD01G1135400 Malus domestica
MD07G1200100 Malus domestica
Medtr5g079920 Medicago truncatula
MELO3C023865.2 Cucumis melo
Migut.F01444 Erythranthe guttata
MSTRG.284 Avicennia marina
Nitab4.5_0000005g0500 Nicotiana tabacum
Nitab4.5_0000005g0510 Nicotiana tabacum
Nitab4.5_0000897g0020 Nicotiana tabacum
Nn2g11126 Nelumbo nucifera
Oeu047310.1 Olea europaea
Oeu053152.1 Olea europaea
Oeu053461.1 Olea europaea
Os01g0973300 Oryza sativa ssp. japonica
Peaxi162Scf00658g00843 Petunia axillaris
PGR044G2694 Punica granatum
PGSC0003DMG400029682 Solanum tuberosum
Phvul.008G232400 Phaseolus vulgaris
Potri.010G202800 Populus trichocarpa
Pp3c8_13030 Physcomitrium patens
Pp3c8_13033 Physcomitrium patens
PRCOL_00005543 Prasinoderma coloniale
Prupe.2G236800 Prunus persica
Psat2g041280 Pisum sativum
PSO339G0476 Papaver somniferum
PSO384G3826 Papaver somniferum
QL08p059630 Quercus lobata
RcHm_v2.0_Chr1g0367761 Rosa chinensis
RcHm_v2.0_Chr2g0137011 Rosa chinensis
Rhsim09G0166500 Rhododendron simsii
Sabra10G0156500 Salix brachista
SalBow3G0200 Salvia bowleyana
Sc10g0001660 Simmondsia chinensis
Sed0007030 Sechium edule
SEGI_25143 Sequoiadendron giganteum
SEGI_34241 Sequoiadendron giganteum
SGA_v2.0_scaffold2G00997 Striga asiatica
SHI22762 Sapria himalayana
SHI22763 Sapria himalayana
SHI22765 Sapria himalayana
SHI22767 Sapria himalayana
SHI22769 Sapria himalayana
SHI22771 Sapria himalayana
SHI22775 Sapria himalayana
SMO230G0023 Selaginella moellendorffii
SMO230G0031 Selaginella moellendorffii
SMO230G0053 Selaginella moellendorffii
SMO230G0106 Selaginella moellendorffii
Solyc06g043030.4 Solanum lycopersicum
Sopen06g013510 Solanum pennellii
Sp5g06990 Schrenkiella parvula
TAR623G0262 Trochodendron aralioides
THA.LOC104808042 Tarenaya hassleriana
Thecc.10G040400 Theobroma cacao
Thhalv10010081m.g Eutrema salsugineum
TPR.G3490 Trifolium pratense
TWI38G0403 Tripterygium wilfordii
TWI63G1141 Tripterygium wilfordii
unitig_21.g20296 Utricularia gibba
vmacro10228 Vaccinium macrocarpon
VMungo0647G0005 Vigna mungo
Zm00001eb260950 Zea mays

User provided reference genes

Program Settings