Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p20970 Brassica napus
A07p18220 Brassica napus
Aa31LG5G8800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.588 Anthoceros agrestis
Actinidia24221 Actinidia chinensis
Ah.08g215670 Amaranthus hybridus
AL4G21450 Arabidopsis lyrata
Aqoxy4G02763 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CJK6JS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G66SVD Arachis hypogaea
AT2G27460 Arabidopsis thaliana
ATR0776G017 Amborella trichopoda
Atru.chr3.3236 Acer truncatum
AUR62009750 Chenopodium quinoa
AUR62036195 Chenopodium quinoa
BcaB01g01177 Brassica carinata
BcaB02g10090 Brassica carinata
BcaC02g10877 Brassica carinata
BolC4t23911H Brassica oleracea
BolC4t27208H Brassica oleracea
BraA04t17666Z Brassica rapa
BraA07t29538Z Brassica rapa
C04p24140 Brassica napus
C04p56760 Brassica napus
CAN.G1524.4 Capsicum annuum
CANSAT54G0764 Cannabis sativa
CARHR120110 Cardamine hirsuta
Carub.0004s0808 Capsella rubella
Ca_19411_v3 Cicer arietinum L.
CBR_g98 Chara braunii
Cc01_g09050 Coffea canephora
CDE06G1114 Ceratophyllum demersum
CDE08G0681 Ceratophyllum demersum
CDE08G1408 Ceratophyllum demersum
Ciclev10027862m.g Citrus clementina
CiPaw.13G135100 Carya illinoinensis
ClCG01G011880 Citrullus lanatus
ClCG01G011900 Citrullus lanatus
ClCG01G011910 Citrullus lanatus
COL.COLO4_19854 Corchorus olitorius
Cpa.g.sc2302.1 Carica papaya
Cpa.g.sc32.21 Carica papaya
Cpa.g.sc3326.1 Carica papaya
Cre09.g392504 Chlamydomonas reinhardtii
CsaV3_1G014870 Cucumis sativus L.
CSS0020343 Camellia sinensis var. sinensis
DCAR_010345 Daucus carota
Dinv22838 Davidia involucrata
Dinv42548 Davidia involucrata
Duzib150G0176 Durio zibethinus
ECA233G5657 Erigeron canadensis
ECA246G2410 Erigeron canadensis
EL10Ac7g15829 Beta vulgaris
Eucgr.B03845 Eucalyptus grandis
FAN11G3425 Fragaria x ananassa
FAN16G1814 Fragaria x ananassa
FAN21G2427 Fragaria x ananassa
FAN25G2046 Fragaria x ananassa
FvH4_3g24980 Fragaria vesca
Glyma.11G182800 Glycine max
Glyma.12G089700 Glycine max
Gohir.A05G080300 Gossypium hirsutum
Gohir.A08G005400 Gossypium hirsutum
Gohir.D05G083300 Gossypium hirsutum
Gohir.D05G303801 Gossypium hirsutum
Gohir.D06G076550 Gossypium hirsutum
Gohir.D06G132050 Gossypium hirsutum
Gohir.D08G015800 Gossypium hirsutum
Gohir.D11G083850 Gossypium hirsutum
Gohir.D11G215501 Gossypium hirsutum
Gohir.D11G227001 Gossypium hirsutum
Gorai.004G010100 Gossypium raimondii
Gorai.007G089400 Gossypium raimondii
Gorai.009G085000 Gossypium raimondii
GSVIVG01036116001 Vitis vinifera
HanXRQChr13g0397471 Helianthus annuus
HanXRQChr16g0526961 Helianthus annuus
Haze_23368 Corylus avellana
Haze_23369 Corylus avellana
Hma1.2p1_0063F.1_g034470 Hydrangea macrophylla
Hma1.2p1_0587F.1_g184290 Hydrangea macrophylla
HPP92_011904 Vanilla planifolia
Hund18760 Selenicereus undatus
Lalb_Chr03g0028121 Lupinus albus
Lalb_Chr19g0136431 Lupinus albus
Lj1C236G5 Lonicera japonica
Lj3g0009034 Lotus japonicus
Lsat_1_v5_gn_6_38881 Lactuca sativa
Manes.11G162300 Manihot esculenta
Mapoly0020s0029 Marchantia polymorpha
MCO07G305 Micromonas commoda
MD03G1145900 Malus domestica
MD11G1164800 Malus domestica
Medtr4g052930 Medicago truncatula
MELO3C004700.2 Cucumis melo
Migut.N02488 Erythranthe guttata
Nitab4.5_0000755g0090 Nicotiana tabacum
Nitab4.5_0012235g0010 Nicotiana tabacum
Nn6g34880 Nelumbo nucifera
Oeu035565.1 Olea europaea
Os04g0412900 Oryza sativa ssp. japonica
Os05g0443300 Oryza sativa ssp. japonica
Peaxi162Scf00040g00020 Petunia axillaris
PGR102G0622 Punica granatum
PGSC0003DMG400026338 Solanum tuberosum
Phvul.011G094800 Phaseolus vulgaris
Potri.004G201800 Populus trichocarpa
Potri.009G163300 Populus trichocarpa
Pp3c17_10 Physcomitrium patens
Pp3c19_350 Physcomitrium patens
Pp3c23_90 Physcomitrium patens
Pp3c26_15780 Physcomitrium patens
Pp3c2_38440 Physcomitrium patens
Pp3c3_38220 Physcomitrium patens
Pp3c5_29140 Physcomitrium patens
Pp3c9_12900 Physcomitrium patens
Pp3c9_6470 Physcomitrium patens
Pp3c9_6480 Physcomitrium patens
PRCOL_00001783 Prasinoderma coloniale
Prupe.6G130700 Prunus persica
Psat7g187800 Pisum sativum
PSO339G0142 Papaver somniferum
PSO384G2406 Papaver somniferum
QL01p012154 Quercus lobata
RcHm_v2.0_Chr1g0324351 Rosa chinensis
RcHm_v2.0_Chr5g0016621 Rosa chinensis
RcHm_v2.0_Chr5g0016631 Rosa chinensis
RcHm_v2.0_Chr5g0040971 Rosa chinensis
RcHm_v2.0_Chr5g0040981 Rosa chinensis
RcHm_v2.0_Chr5g0044471 Rosa chinensis
RcHm_v2.0_Chr5g0044481 Rosa chinensis
RcHm_v2.0_Chr5g0044841 Rosa chinensis
RcHm_v2.0_Chr5g0045601 Rosa chinensis
Rhsim13G0112600 Rhododendron simsii
Sabra04G0136400 Salix brachista
Sabra09G0127400 Salix brachista
SalBow3G0413 Salvia bowleyana
Sc21g0007070 Simmondsia chinensis
Sed0027037 Sechium edule
SEGI_10684 Sequoiadendron giganteum
SEGI_12301 Sequoiadendron giganteum
SEGI_33849 Sequoiadendron giganteum
SGA_v2.0_scaffold177G39411 Striga asiatica
SGA_v2.0_scaffold295G47522 Striga asiatica
SMO119G0407 Selaginella moellendorffii
Solyc11g068500.2 Solanum lycopersicum
Sopen11g027210 Solanum pennellii
Sp4g10250 Schrenkiella parvula
TAR623G1468 Trochodendron aralioides
THA.LOC104815723 Tarenaya hassleriana
THA.LOC104826427 Tarenaya hassleriana
Thecc.09G282400 Theobroma cacao
Thhalv10016271m.g Eutrema salsugineum
TPR.G17233 Trifolium pratense
TWI31G0469 Tripterygium wilfordii
vmacro03323 Vaccinium macrocarpon
VMungo1127G0197 Vigna mungo
Zm00001eb288910 Zea mays
Zm00001eb348320 Zea mays
Zm00001eb421940 Zea mays

User provided reference genes

Program Settings