Gene: AT2G27460
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G27460
- Transcript Identifier AT2G27460.1
- Gene Type Coding gene
- Location Chr2 : 11740670-11744867 : positive
Gene Family Information
- ID HOM05D004510
- #Genes/#Species 160/95
- Phylogenetic origin
- ID ORTHO05D005302
- #Genes/#Species 160/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT2G27460.1
- uniprot Q9ZQH3
Descriptions
- Description sec23/sec24 transport family protein
- Computational description sec23/sec24 transport family protein; FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT3G07100.1); Has 1620 Blast hits to 1606 proteins in 237 species: Archae - 0; Bacteria - 2; Metazoa - 540; Fungi - 539; Plants - 300; Viruses - 0; Other Eukaryotes - 239 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006888 | IEA | GOA Database | endoplasmic reticulum to Golgi vesicle-mediated transport | |
GO:0006888 | IEA | InterPro | endoplasmic reticulum to Golgi vesicle-mediated transport | |
GO:0006886 | IEA | Gene Ontology | intracellular protein transport | |
GO:0006886 | IEA | InterPro | intracellular protein transport | |
GO:0015031 | IEA | GOA Database | protein transport | |
GO:0090110 | IBA | Gene Ontology | COPII-coated vesicle cargo loading | 1 |
GO:0048658 | IMP | Gene Ontology | anther wall tapetum development | 2 |
GO:0010584 | IMP | Gene Ontology | pollen exine formation | 2 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000149 | IBA | Gene Ontology | SNARE binding | 1 |
GO:0008270 | IEA | GOA Database | zinc ion binding | |
GO:0008270 | IBA | Gene Ontology | zinc ion binding | 1 |
GO:0008270 | IEA | InterPro | zinc ion binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0030127 | IEA | GOA Database | COPII vesicle coat | |
GO:0030127 | IBA | Gene Ontology | COPII vesicle coat | 1 |
GO:0030127 | IEA | InterPro | COPII vesicle coat | |
GO:0070971 | IDA IBA | Gene Ontology | endoplasmic reticulum exit site | 1 2 |
GO:0005737 | IDA ISM | Gene Ontology | cytoplasm | 2 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |