Gene: AT2G27460

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G27460
  • Transcript Identifier AT2G27460.1
  • Gene Type Coding gene
  • Location Chr2 : 11740670-11744867 : positive

Gene Family Information

  • ID HOM05D004510
  • #Genes/#Species 160/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G27460.1
  • uniprot Q9ZQH3

Descriptions

  • Description sec23/sec24 transport family protein
  • Computational description sec23/sec24 transport family protein; FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT3G07100.1); Has 1620 Blast hits to 1606 proteins in 237 species: Archae - 0; Bacteria - 2; Metazoa - 540; Fungi - 539; Plants - 300; Viruses - 0; Other Eukaryotes - 239 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006888
IEA
GOA Databaseendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006888
IEA
InterProendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006886
IEA
Gene Ontologyintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0015031
IEA
GOA Databaseprotein transport
GO:0090110
IBA
Gene OntologyCOPII-coated vesicle cargo loading1
GO:0048658
IMP
Gene Ontologyanther wall tapetum development2
GO:0010584
IMP
Gene Ontologypollen exine formation2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000149
IBA
Gene OntologySNARE binding1
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IBA
Gene Ontologyzinc ion binding1
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030127
IEA
GOA DatabaseCOPII vesicle coat
GO:0030127
IBA
Gene OntologyCOPII vesicle coat1
GO:0030127
IEA
InterProCOPII vesicle coat
GO:0070971
IDA
IBA
Gene Ontologyendoplasmic reticulum exit site1 2
GO:0005737
IDA
ISM
Gene Ontologycytoplasm2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036174 Zinc finger, Sec23/Sec24-type superfamily
IPR006896 Sec23/Sec24, trunk domain
IPR036465 von Willebrand factor A-like domain superfamily
IPR006895 Zinc finger, Sec23/Sec24-type
IPR006900 Sec23/Sec24, helical domain
IPR036175 Sec23/Sec24 helical domain superfamily
Mapman id Description
35.1 not assigned.annotated