Gene: Pp3c9_12900

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c9_12900
  • Transcript Identifier Pp3c9_12900V3.1
  • Gene Type Coding gene
  • Location Chr09 : 8668426-8673928 : negative

Gene Family Information

  • ID HOM05D004510
  • #Genes/#Species 160/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c9_12900V3.1
  • pacid 32911642
  • alias Phpat.009G049900
  • alias Pp1s29_149V6
  • alias Phypa_70713
  • uniprot A9RUG6

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006888
IEA
GOA Databaseendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006888
IEA
InterProendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0010584
ISO
PLAZA Integrative Orthologypollen exine formation AT2G27460
GO:0048658
ISO
PLAZA Integrative Orthologyanther wall tapetum development AT2G27460
GO:0090110
IBA
GOA DatabaseCOPII-coated vesicle cargo loading
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000149
IBA
GOA DatabaseSNARE binding
GO:0008270
IBA
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G27460
GO:0030127
IBA
IEA
GOA DatabaseCOPII vesicle coat
GO:0030127
IEA
InterProCOPII vesicle coat
GO:0070971
IBA
GOA Databaseendoplasmic reticulum exit site

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006896 Sec23/Sec24, trunk domain
IPR036174 Zinc finger, Sec23/Sec24-type superfamily
IPR036465 von Willebrand factor A-like domain superfamily
IPR006895 Zinc finger, Sec23/Sec24-type
IPR006900 Sec23/Sec24, helical domain
IPR036175 Sec23/Sec24 helical domain superfamily
Mapman id Description
35.1 not assigned.annotated