Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p34260 Brassica napus
Aa31LG5G16100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1933 Anthoceros agrestis
Actinidia03882 Actinidia chinensis
Actinidia03883 Actinidia chinensis
Actinidia03884 Actinidia chinensis
Actinidia03885 Actinidia chinensis
Actinidia03991 Actinidia chinensis
Actinidia03992 Actinidia chinensis
Actinidia03993 Actinidia chinensis
Actinidia37752 Actinidia chinensis
Ah.12g059670 Amaranthus hybridus
AL3G16340 Arabidopsis lyrata
Aqoxy1G00646 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.71A9RU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C5PQVK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S879XT Arachis hypogaea
AT3G05680 Arabidopsis thaliana
ATR0665G194 Amborella trichopoda
Atru.chr8.1340 Acer truncatum
AUR62027347 Chenopodium quinoa
AUR62040133 Chenopodium quinoa
BcaB04g19244 Brassica carinata
BcaB04g19248 Brassica carinata
BNapus_Darmor_BZH_scaffold_118p00130 Brassica napus
BolC3t16451H Brassica oleracea
BraA01t04438Z Brassica rapa
BraA03t12600Z Brassica rapa
C03p41680 Brassica napus
CAN.G861.37 Capsicum annuum
CANSAT64G0287 Cannabis sativa
CARHR080130 Cardamine hirsuta
Carub.0003s0502 Capsella rubella
Ca_11691_v3 Cicer arietinum L.
CBR_g906 Chara braunii
Cc06_g06650 Coffea canephora
CDE04G0059 Ceratophyllum demersum
CDE04G1213 Ceratophyllum demersum
CDE04G2111 Ceratophyllum demersum
CDE04G2905 Ceratophyllum demersum
CDE04G3616 Ceratophyllum demersum
CDE07G0138 Ceratophyllum demersum
CDE07G0146 Ceratophyllum demersum
CDE07G2012 Ceratophyllum demersum
Cfa020044 Carpinus fangiana
Ciclev10010887m.g Citrus clementina
CiPaw.10G018400 Carya illinoinensis
ClCG10G018280 Citrullus lanatus
COL.COLO4_29556 Corchorus olitorius
Cpa.g.sc104.20 Carica papaya
Cpa.g.sc104.21 Carica papaya
CsaV3_3G038030 Cucumis sativus L.
CSS0006601 Camellia sinensis var. sinensis
CSS0017834 Camellia sinensis var. sinensis
CSS0032246 Camellia sinensis var. sinensis
CSS0033092 Camellia sinensis var. sinensis
DCAR_020696 Daucus carota
Dinv12344 Davidia involucrata
Dinv31766 Davidia involucrata
Dinv31767 Davidia involucrata
Duzib093G0602 Durio zibethinus
Duzib093G0840 Durio zibethinus
ECA233G4189 Erigeron canadensis
ECA233G4409 Erigeron canadensis
EL10Ac5g11771 Beta vulgaris
Eucgr.A02578 Eucalyptus grandis
FAN02G2855 Fragaria x ananassa
FAN05G1531 Fragaria x ananassa
FAN05G5173 Fragaria x ananassa
FAN09G0172 Fragaria x ananassa
FAN09G4366 Fragaria x ananassa
FAN14G5903 Fragaria x ananassa
FvH4_6g20410 Fragaria vesca
Glyma.02G195600 Glycine max
Glyma.10G082100 Glycine max
Gohir.A04G053650 Gossypium hirsutum
Gohir.D04G091700 Gossypium hirsutum
Gorai.009G393700 Gossypium raimondii
GSVIVG01020162001 Vitis vinifera
HanXRQChr13g0398531 Helianthus annuus
Haze_20160 Corylus avellana
Haze_20162 Corylus avellana
HPP92_005908 Vanilla planifolia
Lalb_Chr06g0172651 Lupinus albus
Lj1A1205G57 Lonicera japonica
Lj1A1205T55 Lonicera japonica
Lj5g0003460 Lotus japonicus
Lsat_1_v5_gn_6_33801 Lactuca sativa
Manes.09G046200 Manihot esculenta
Mapoly0014s0197 Marchantia polymorpha
Mapoly0074s0069 Marchantia polymorpha
MBI03_g28304_MAGBIO Magnolia biondii
MBI03_g28305_MAGBIO Magnolia biondii
MD12G1041200 Malus domestica
MD12G1041400 Malus domestica
MD14G1040500 Malus domestica
Medtr1g056800 Medicago truncatula
MELO3C009545.2 Cucumis melo
Migut.J00694 Erythranthe guttata
MSTRG.5892 Avicennia marina
Nitab4.5_0001495g0100 Nicotiana tabacum
Nitab4.5_0004363g0030 Nicotiana tabacum
Nn6g34673 Nelumbo nucifera
Oeu035645.2 Olea europaea
Oeu036109.3 Olea europaea
Oeu036110.1 Olea europaea
Os03g0554900 Oryza sativa ssp. japonica
Os03g0554950 Oryza sativa ssp. japonica
Peaxi162Scf00171g00133 Petunia axillaris
PGR004G1788 Punica granatum
PGSC0003DMG400015284 Solanum tuberosum
Phvul.007G267500 Phaseolus vulgaris
Potri.016G069100 Populus trichocarpa
Pp3c22_17700 Physcomitrium patens
Prupe.7G093800 Prunus persica
Psat0s2215g0120 Pisum sativum
Psat0s2215g0200 Pisum sativum
Psat0s5567g0040 Pisum sativum
Psat1g103000 Pisum sativum
Psat2g053520 Pisum sativum
Psat2g116200 Pisum sativum
Psat2g116240 Pisum sativum
Psat2g137560 Pisum sativum
Psat5g098480 Pisum sativum
Psat5g133160 Pisum sativum
Psat5g196160 Pisum sativum
Psat5g196200 Pisum sativum
Psat6g115600 Pisum sativum
Psat6g150080 Pisum sativum
PSO339G1314 Papaver somniferum
PSO384G1970 Papaver somniferum
QL07p036440 Quercus lobata
RcHm_v2.0_Chr3g0476141 Rosa chinensis
RcHm_v2.0_Chr3g0476171 Rosa chinensis
Rhsim04G0099300 Rhododendron simsii
Rhsim04G0136900 Rhododendron simsii
Sabra16G0070000 Salix brachista
Sc22g0002960 Simmondsia chinensis
Sed0007001 Sechium edule
SEGI_03524 Sequoiadendron giganteum
SEGI_20776 Sequoiadendron giganteum
SEGI_22283 Sequoiadendron giganteum
SGA_v2.0_scaffold115G32146 Striga asiatica
SHI25001 Sapria himalayana
SHI25003 Sapria himalayana
SHI25008 Sapria himalayana
Solyc03g020020.3 Solanum lycopersicum
Sopen03g029610 Solanum pennellii
Sp3g04560 Schrenkiella parvula
TAR369G0229 Trochodendron aralioides
TAR375G0123 Trochodendron aralioides
TAR375G1129 Trochodendron aralioides
THA.LOC104816640 Tarenaya hassleriana
Thecc.05G105900 Theobroma cacao
Thhalv10019873m.g Eutrema salsugineum
TPR.G15240 Trifolium pratense
TPR.G2812 Trifolium pratense
TWI74G0602 Tripterygium wilfordii
unitig_578.g15811 Utricularia gibba
vmacro07479 Vaccinium macrocarpon
VMungo0720G0551 Vigna mungo
Zm00001eb220020 Zea mays

User provided reference genes

Program Settings