Gene: Solyc03g020020.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc03g020020.3
  • Transcript Identifier Solyc03g020020.3.1
  • Gene Type Coding gene
  • Location SL4.0ch03 : 55664258-55686740 : positive

Gene Family Information

  • ID HOM05D004426
  • #Genes/#Species 162/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc03g020020.3.1
  • uniprot A0A3Q7FEI9
  • gene_id Solyc03g020020

Descriptions

  • Description embryo defective 2016 (AHRD V3.3 *** AT3G05680.2)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT3G05680
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G05680
GO:0080009
ISO
PLAZA Integrative OrthologymRNA methylation AT3G05680

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G05680
GO:0008174
ISO
PLAZA Integrative OrthologymRNA methyltransferase activity AT3G05680

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT3G05680
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT3G05680

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR026736 Protein virilizer
IPR031801 Virilizer, N-terminal
Mapman id Description
16.5.8.1.1.4 RNA processing.RNA modification.mRNA methylation.adenosine N6-methylation.adenosine N6-methyltransferase complex.regulatory component VIR