Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p29020 Brassica napus
Aa31LG1G11470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3818 Anthoceros agrestis
Actinidia18350 Actinidia chinensis
Actinidia32507 Actinidia chinensis
Ah.15g094660 Amaranthus hybridus
AL5G27440 Arabidopsis lyrata
Aqoxy1G01621 Aquilegia oxysepala
Aqoxy5G04133 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BJ0H8V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C8N37A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GNE3C0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HBQ2MY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NVW2FV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q83G00 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SPAE12 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y7Q0ZL Arachis hypogaea
AT3G48110 Arabidopsis thaliana
ATR0057G028 Amborella trichopoda
Atru.chr5.121 Acer truncatum
AUR62001366 Chenopodium quinoa
AUR62025581 Chenopodium quinoa
BcaB02g07011 Brassica carinata
BolC6t38401H Brassica oleracea
BraA07t30542Z Brassica rapa
C06p32790 Brassica napus
CAN.G1473.1 Capsicum annuum
CAN.G1473.2 Capsicum annuum
CAN.G1497.17 Capsicum annuum
CANSAT25G3675 Cannabis sativa
CANSAT25G3884 Cannabis sativa
CARHR156840 Cardamine hirsuta
Carub.0005s1421 Capsella rubella
Carub.0005s1422 Capsella rubella
Ca_25801_v3 Cicer arietinum L.
CBR_g19146 Chara braunii
Cc02_g25150 Coffea canephora
CDE02G3124 Ceratophyllum demersum
CDE09G1306 Ceratophyllum demersum
CDE09G1442 Ceratophyllum demersum
Cfa011065 Carpinus fangiana
Ciclev10018701m.g Citrus clementina
CiPaw.14G020100 Carya illinoinensis
ClCG06G002430 Citrullus lanatus
COL.COLO4_07155 Corchorus olitorius
COL.COLO4_07156 Corchorus olitorius
COL.COLO4_30045 Corchorus olitorius
COL.COLO4_30046 Corchorus olitorius
COL.COLO4_33296 Corchorus olitorius
COL.COLO4_35716 Corchorus olitorius
Cpa.g.c46080 Carica papaya
Cpa.g.sc22.52 Carica papaya
Cpa.g.sc22.55 Carica papaya
Cpa.g.sc22.56 Carica papaya
Cre10.g433000 Chlamydomonas reinhardtii
CsaV3_6G008710 Cucumis sativus L.
CSS0020521 Camellia sinensis var. sinensis
DCAR_029470 Daucus carota
Dinv43612 Davidia involucrata
Dinv44059 Davidia involucrata
Duzib268G0035 Durio zibethinus
ECA234G0959 Erigeron canadensis
EL10Ac7g18223 Beta vulgaris
Eucgr.H04784 Eucalyptus grandis
FAN01G0685 Fragaria x ananassa
FAN03G1687 Fragaria x ananassa
FAN06G1066 Fragaria x ananassa
FAN06G3830 Fragaria x ananassa
FAN10G2373 Fragaria x ananassa
FAN10G4150 Fragaria x ananassa
FvH4_7g10270 Fragaria vesca
Glyma.03G110500 Glycine max
Glyma.03G111000 Glycine max
Gohir.A08G029300 Gossypium hirsutum
Gohir.D08G040000 Gossypium hirsutum
Gorai.004G038800 Gossypium raimondii
GSVIVG01018288001 Vitis vinifera
HanXRQChr07g0189481 Helianthus annuus
HanXRQChr09g0251011 Helianthus annuus
HanXRQChr09g0251021 Helianthus annuus
HanXRQChr16g0520031 Helianthus annuus
HanXRQChr16g0521111 Helianthus annuus
Haze_02852 Corylus avellana
Haze_27357 Corylus avellana
HPP92_002531 Vanilla planifolia
Hund18610 Selenicereus undatus
Lalb_Chr07g0195401 Lupinus albus
Lj3g0007750 Lotus japonicus
Lj7C547G5 Lonicera japonica
Lsat_1_v5_gn_4_171980 Lactuca sativa
Lsat_1_v5_gn_4_39461 Lactuca sativa
Lsat_1_v5_gn_5_158961 Lactuca sativa
Manes.05G055300 Manihot esculenta
Mapoly0186s0003 Marchantia polymorpha
MCO03G257 Micromonas commoda
MD07G1109400 Malus domestica
Medtr8g006955 Medicago truncatula
MELO3C022290.2 Cucumis melo
Migut.B01531 Erythranthe guttata
MSTRG.20687 Avicennia marina
Nitab4.5_0000920g0050 Nicotiana tabacum
Nitab4.5_0002685g0030 Nicotiana tabacum
Nn1g00835 Nelumbo nucifera
Oeu000053.1 Olea europaea
Os06g0103600 Oryza sativa ssp. japonica
Peaxi162Scf00475g00041 Petunia axillaris
Phvul.010G049401 Phaseolus vulgaris
Potri.014G049200 Populus trichocarpa
Pp3c1_42870 Physcomitrium patens
PRCOL_00000491 Prasinoderma coloniale
Prupe.2G132400 Prunus persica
Psat4g224760 Pisum sativum
Psat7g007000 Pisum sativum
Psat7g007080 Pisum sativum
Psat7g148920 Pisum sativum
PSO782G5506 Papaver somniferum
QL04p030045 Quercus lobata
QL04p030068 Quercus lobata
QL09p024682 Quercus lobata
QL10p000960 Quercus lobata
RcHm_v2.0_Chr1g0348021 Rosa chinensis
Rhsim07G0036300 Rhododendron simsii
Sabra14G0035000 Salix brachista
SalBow5G1783 Salvia bowleyana
Sc12g0011040 Simmondsia chinensis
Sed0020409 Sechium edule
SEGI_01066 Sequoiadendron giganteum
SEGI_08386 Sequoiadendron giganteum
SEGI_14209 Sequoiadendron giganteum
SEGI_36766 Sequoiadendron giganteum
SEGI_38096 Sequoiadendron giganteum
SEGI_38441 Sequoiadendron giganteum
SGA_v2.0_scaffold340G49325 Striga asiatica
SGA_v2.0_scaffold52G19227 Striga asiatica
SGA_v2.0_scaffold52G19231 Striga asiatica
SGA_v2.0_scaffold902G53711 Striga asiatica
Solyc01g090200.4 Solanum lycopersicum
Sopen01g035990 Solanum pennellii
Sp5g30300 Schrenkiella parvula
TAR375G0769 Trochodendron aralioides
TAR375G0830 Trochodendron aralioides
THA.LOC104816999 Tarenaya hassleriana
Thecc.01G108300 Theobroma cacao
Thecc.01G395500 Theobroma cacao
Thecc.03G162400 Theobroma cacao
Thecc.03G247400 Theobroma cacao
Thecc.04G201300 Theobroma cacao
Thecc.05G208900 Theobroma cacao
Thhalv10018047m.g Eutrema salsugineum
TPR.G13525 Trifolium pratense
TPR.G17647 Trifolium pratense
TPR.G20792 Trifolium pratense
TPR.G22860 Trifolium pratense
TPR.G2648 Trifolium pratense
TPR.G33119 Trifolium pratense
TPR.G34724 Trifolium pratense
TPR.G40130 Trifolium pratense
TWI59G1250 Tripterygium wilfordii
unitig_0.g1355 Utricularia gibba
vmacro13500 Vaccinium macrocarpon
VMungo0331G1046 Vigna mungo
Zm00001eb379480 Zea mays

User provided reference genes

Program Settings