Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p27970 Brassica napus
Aa31LG8G7630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3437 Anthoceros agrestis
Actinidia06325 Actinidia chinensis
Actinidia06326 Actinidia chinensis
Actinidia39384 Actinidia chinensis
Ah.04g161770 Amaranthus hybridus
Ah.06g193530 Amaranthus hybridus
AL3G34730 Arabidopsis lyrata
Aqoxy2G00106 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6DX332 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LD2WL8 Arachis hypogaea
AT3G20810 Arabidopsis thaliana
ATR0605G084 Amborella trichopoda
Atru.chr3.2519_Atru.chr3.2520 Acer truncatum
AUR62000082 Chenopodium quinoa
AUR62019254 Chenopodium quinoa
AUR62043680 Chenopodium quinoa
BcaB06g26154 Brassica carinata
BcaC05g28276 Brassica carinata
BcaC05g28277 Brassica carinata
BcaC05g28278 Brassica carinata
BolC5t33056H Brassica oleracea
BraA05t21680Z Brassica rapa
C03p51290 Brassica napus
C05p43260 Brassica napus
CAN.G103.12 Capsicum annuum
CAN.G1385.1 Capsicum annuum
CAN.G388.54 Capsicum annuum
CANSAT54G1224 Cannabis sativa
CARHR096650 Cardamine hirsuta
CARHR096660 Cardamine hirsuta
CARHR096670 Cardamine hirsuta
Carub.0003s2077 Capsella rubella
Ca_20582_v3 Cicer arietinum L.
Ca_27145_v3 Cicer arietinum L.
CBR_g68529 Chara braunii
Cc01_g04260 Coffea canephora
CDE05G0158 Ceratophyllum demersum
Cfa009704 Carpinus fangiana
Ciclev10015488m.g Citrus clementina
CiPaw.13G165000 Carya illinoinensis
ClCG03G013420 Citrullus lanatus
ClCG03G013430 Citrullus lanatus
Cpa.g.sc84.102 Carica papaya
Cre11.g467768 Chlamydomonas reinhardtii
CsaV3_1G042600 Cucumis sativus L.
CSS0021936 Camellia sinensis var. sinensis
DCAR_000095 Daucus carota
DCAR_002041 Daucus carota
DCAR_007794 Daucus carota
DCAR_010505 Daucus carota
DCAR_013044 Daucus carota
Dinv36300 Davidia involucrata
Duzib150G1622 Durio zibethinus
Duzib168G0032 Durio zibethinus
ECA233G0260 Erigeron canadensis
EL10Ac4g10313 Beta vulgaris
Eucgr.J00814 Eucalyptus grandis
FAN11G1953 Fragaria x ananassa
FAN11G3211 Fragaria x ananassa
FAN16G1269 Fragaria x ananassa
FAN21G0217 Fragaria x ananassa
FAN25G0488 Fragaria x ananassa
FvH4_3g43600 Fragaria vesca
FvH4_3g43632 Fragaria vesca
Glyma.04G176050 Glycine max
Glyma.11G130600 Glycine max
Glyma.12G055000 Glycine max
Gohir.A06G108900 Gossypium hirsutum
Gohir.D06G112900 Gossypium hirsutum
Gorai.010G128800 Gossypium raimondii
GSVIVG01025322001 Vitis vinifera
HanXRQChr02g0056491 Helianthus annuus
HanXRQChr13g0403921 Helianthus annuus
HanXRQChr16g0505821 Helianthus annuus
Haze_23052 Corylus avellana
Haze_23057 Corylus avellana
Hma1.2p1_0143F.1_g064490 Hydrangea macrophylla
HPP92_017970 Vanilla planifolia
Hund22076 Selenicereus undatus
Lalb_Chr01g0003291 Lupinus albus
Lalb_Chr19g0138221 Lupinus albus
Lalb_Chr19g0138231 Lupinus albus
Lj2C654G2 Lonicera japonica
Lj3g0003248 Lotus japonicus
Lsat_1_v5_gn_6_50061 Lactuca sativa
Manes.06G168600 Manihot esculenta
Manes.14G013900 Manihot esculenta
Mapoly0036s0149 Marchantia polymorpha
MBI01_g05106_MAGBIO Magnolia biondii
MBI01_g41296_MAGBIO Magnolia biondii
MCO01G020 Micromonas commoda
MCO01G088 Micromonas commoda
MCO01G585 Micromonas commoda
MCO02G375 Micromonas commoda
MCO05G292 Micromonas commoda
MCO11G675 Micromonas commoda
MCO12G327 Micromonas commoda
MD03G1020700 Malus domestica
MD11G1022000 Malus domestica
MD11G1022300 Malus domestica
Medtr4g066020 Medicago truncatula
MELO3C015209.2 Cucumis melo
MELO3C025411.2 Cucumis melo
MELO3C027435.2 Cucumis melo
Migut.D00562 Erythranthe guttata
MSTRG.21407 Avicennia marina
Nitab4.5_0000175g0140 Nicotiana tabacum
Nitab4.5_0003250g0020 Nicotiana tabacum
Nn2g15536 Nelumbo nucifera
Nn7g36075 Nelumbo nucifera
Oeu024454.3 Olea europaea
Os08g0508500 Oryza sativa ssp. japonica
Os09g0489200 Oryza sativa ssp. japonica
Peaxi162Scf00559g00213 Petunia axillaris
PGR119G1205 Punica granatum
PGSC0003DMG400021346 Solanum tuberosum
Phvul.011G056900 Phaseolus vulgaris
Potri.001G016200 Populus trichocarpa
Pp3c14_10900 Physcomitrium patens
Pp3c17_10850 Physcomitrium patens
Pp3c1_28300 Physcomitrium patens
Pp3c2_7150 Physcomitrium patens
Pp3c5_1010 Physcomitrium patens
PRCOL_00000443 Prasinoderma coloniale
PRCOL_00002632 Prasinoderma coloniale
PRCOL_00002851 Prasinoderma coloniale
PRCOL_00006664 Prasinoderma coloniale
Prupe.6G015700 Prunus persica
Psat7g213880 Pisum sativum
PSO384G0662 Papaver somniferum
QL01p006124 Quercus lobata
QL01p016023 Quercus lobata
RcHm_v2.0_Chr5g0076021 Rosa chinensis
RcHm_v2.0_Chr5g0078171 Rosa chinensis
RcHm_v2.0_Chr5g0078191 Rosa chinensis
RcHm_v2.0_Chr5g0078201 Rosa chinensis
RcHm_v2.0_Chr5g0078281 Rosa chinensis
RcHm_v2.0_Chr5g0078291 Rosa chinensis
Rhsim01G0189600 Rhododendron simsii
Sabra01G0011400 Salix brachista
Sc16g0011690 Simmondsia chinensis
Sed0001509 Sechium edule
SEGI_06744 Sequoiadendron giganteum
SEGI_22299 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00802 Striga asiatica
SHI30509 Sapria himalayana
SMO364G0845 Selaginella moellendorffii
Solyc01g006680.4 Solanum lycopersicum
Sopen01g002670 Solanum pennellii
Sp3g18830 Schrenkiella parvula
TAR623G0092 Trochodendron aralioides
THA.LOC104816908 Tarenaya hassleriana
Thecc.09G224700 Theobroma cacao
Thhalv10021129m.g Eutrema salsugineum
TPR.G13661 Trifolium pratense
TWI60G0085 Tripterygium wilfordii
vmacro12711 Vaccinium macrocarpon
vmacro19282 Vaccinium macrocarpon
VMungo1127G0574 Vigna mungo
VMungo1127G1580 Vigna mungo

User provided reference genes

Program Settings