Gene: CiPaw.13G165000
General Information
Structural Information
- Species Carya illinoinensis
- Gene Identifier CiPaw.13G165000
- Transcript Identifier CiPaw.13G165000.2
- Gene Type Coding gene
- Location Chr13 : 31950754-31955909 : negative
Gene Family Information
- ID HOM05D004419
- #Genes/#Species 162/96
- Phylogenetic origin
- ID ORTHO05D005480
- #Genes/#Species 157/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id CiPaw.13G165000.v1.1
- pacid 45812020
- locus Caril.13G163900
Descriptions
- Description K10277 - lysine-specific demethylase 8 [EC:1.14.11.27] (KDM8, JMJD5)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070544 | ISO | PLAZA Integrative Orthology | histone H3-K36 demethylation | AT3G20810 |
| GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT3G20810 |
| GO:0042752 | ISO | PLAZA Integrative Orthology | regulation of circadian rhythm | AT3G20810 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT3G20810 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G20810 |
| GO:0046975 | ISO | PLAZA Integrative Orthology | histone methyltransferase activity (H3-K36 specific) | AT3G20810 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR041667 | Cupin-like domain 8 |
| Mapman id | Description |
|---|---|
| 12.3.3.8.8 | Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM12) |