Gene: PGR119G1205

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR119G1205
  • Transcript Identifier PGR119G1205.02
  • Gene Type Coding gene
  • Location NC_045132.1 : 24876770-24879691 : positive

Gene Family Information

  • ID HOM05D004419
  • #Genes/#Species 162/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031400951.1
  • name LOC116210930
  • name XM_031545091.1
  • id gene-LOC116210930
  • uniprot A0A218WAI2

Descriptions

  • product lysine-specific demethylase JMJ30, transcript variant X2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032259
IEA
GOA Databasemethylation
GO:0070544
ISO
PLAZA Integrative Orthologyhistone H3-K36 demethylation AT3G20810
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT3G20810
GO:0042752
ISO
PLAZA Integrative Orthologyregulation of circadian rhythm AT3G20810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT3G20810
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G20810
GO:0046975
ISO
PLAZA Integrative Orthologyhistone methyltransferase activity (H3-K36 specific) AT3G20810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014710 RmlC-like jelly roll fold
IPR041667 Cupin-like domain 8
IPR003347 JmjC domain
Mapman id Description
12.3.3.8.8 Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM12)