Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p15540 Brassica napus
Aa31LG7G10250 Aethionema arabicum
Actinidia08268 Actinidia chinensis
Actinidia28178 Actinidia chinensis
Actinidia38086 Actinidia chinensis
Ah.06g192890 Amaranthus hybridus
AL7G29060 Arabidopsis lyrata
Aqoxy5G01137 Aquilegia oxysepala
Aqoxy6G02847 Aquilegia oxysepala
AT4G24210 Arabidopsis thaliana
ATR0205G008 Amborella trichopoda
ATR1101G053 Amborella trichopoda
Atru.chr13.769 Acer truncatum
BcaC06g32900 Brassica carinata
BcaC09g50896 Brassica carinata
BcaNung01127 Brassica carinata
BolC1t01875H Brassica oleracea
BraA01t01493Z Brassica rapa
C01p19460 Brassica napus
CAN.G1621.8 Capsicum annuum
CANSAT01G0966 Cannabis sativa
CARHR231630 Cardamine hirsuta
Carub.0007s1686 Capsella rubella
Ca_15926_v3 Cicer arietinum L.
Cc10_g05190 Coffea canephora
CDE04G3464 Ceratophyllum demersum
CDE07G1639 Ceratophyllum demersum
Cfa004067 Carpinus fangiana
Cfa018041 Carpinus fangiana
Cfa018754 Carpinus fangiana
Cfa020705 Carpinus fangiana
Ciclev10002417m.g Citrus clementina
Ciclev10016890m.g Citrus clementina
Ciclev10017723m.g Citrus clementina
Ciclev10024024m.g Citrus clementina
CiPaw.02G005700 Carya illinoinensis
CiPaw.15G050400 Carya illinoinensis
CiPaw.16G035400 Carya illinoinensis
CiPaw.16G035500 Carya illinoinensis
ClCG05G020280 Citrullus lanatus
ClCG08G016220 Citrullus lanatus
COL.COLO4_03644 Corchorus olitorius
Cpa.g.sc21.140 Carica papaya
CsaV3_2G026400 Cucumis sativus L.
CsaV3_4G034760 Cucumis sativus L.
CSS0047169 Camellia sinensis var. sinensis
DCAR_012798 Daucus carota
Dinv26873 Davidia involucrata
Dinv35916 Davidia involucrata
Dinv39259 Davidia involucrata
Duzib041G0027 Durio zibethinus
Duzib093G1937 Durio zibethinus
Duzib116G0411 Durio zibethinus
ECA246G0242 Erigeron canadensis
ECA247G1975 Erigeron canadensis
Eucgr.F00160 Eucalyptus grandis
FAN15G2080 Fragaria x ananassa
FAN20G0811 Fragaria x ananassa
FAN24G0693 Fragaria x ananassa
FAN27G3108 Fragaria x ananassa
FvH4_2g33690 Fragaria vesca
Glyma.04G042900 Glycine max
Glyma.06G043400 Glycine max
Glyma.14G086600 Glycine max
Glyma.17G237800 Glycine max
Gohir.A05G262600 Gossypium hirsutum
Gohir.A06G022200 Gossypium hirsutum
Gohir.D05G264800 Gossypium hirsutum
Gohir.D06G019600 Gossypium hirsutum
Gorai.009G276600 Gossypium raimondii
Gorai.010G023800 Gossypium raimondii
HanXRQChr02g0038061 Helianthus annuus
HanXRQChr04g0103321 Helianthus annuus
HanXRQChr04g0103351 Helianthus annuus
HanXRQChr05g0150141 Helianthus annuus
HanXRQChr09g0267301 Helianthus annuus
Haze_15343 Corylus avellana
Haze_18084 Corylus avellana
Hma1.2p1_0240F.1_g100160 Hydrangea macrophylla
HPP92_004762 Vanilla planifolia
HPP92_027899 Vanilla planifolia
Lalb_Chr11g0062751 Lupinus albus
Lj1g0004679 Lotus japonicus
Lj4C65T11 Lonicera japonica
Lj5g0006485 Lotus japonicus
Lsat_1_v5_gn_1_23100 Lactuca sativa
Lsat_1_v5_gn_4_129880 Lactuca sativa
Lsat_1_v5_gn_6_109301 Lactuca sativa
Manes.05G178400 Manihot esculenta
Mapoly0043s0052 Marchantia polymorpha
MD08G1091700 Malus domestica
MD14G1062200 Malus domestica
MD15G1075800 Malus domestica
Medtr3g102470 Medicago truncatula
Medtr7g014710 Medicago truncatula
MELO3C010832.2 Cucumis melo
MELO3C016791.2 Cucumis melo
Migut.C00522 Erythranthe guttata
MSTRG.25064 Avicennia marina
Nitab4.5_0001984g0070 Nicotiana tabacum
Nitab4.5_0005426g0010 Nicotiana tabacum
Nitab4.5_0005426g0040 Nicotiana tabacum
Nn1g04458 Nelumbo nucifera
Nn1g04467 Nelumbo nucifera
Nn2g11300 Nelumbo nucifera
Nn4g24474 Nelumbo nucifera
Nn5g31361 Nelumbo nucifera
Nn5g31362 Nelumbo nucifera
Nn5g31363 Nelumbo nucifera
Oeu021393.1 Olea europaea
Oeu057260.2 Olea europaea
Peaxi162Scf00266g00081 Petunia axillaris
PGR083G0083 Punica granatum
PGSC0003DMG400003310 Solanum tuberosum
Phvul.009G068500 Phaseolus vulgaris
Potri.002G122300 Populus trichocarpa
Potri.014G022100 Populus trichocarpa
Prupe.1G429300 Prunus persica
Psat5g040440 Pisum sativum
PSO017G6350 Papaver somniferum
PSO170G2383 Papaver somniferum
PSO210G6412 Papaver somniferum
PSO349G0342 Papaver somniferum
QL02p003441 Quercus lobata
QL07p030524 Quercus lobata
RcHm_v2.0_Chr6g0308861 Rosa chinensis
Rhsim06G0057000 Rhododendron simsii
Rhsim07G0223800 Rhododendron simsii
Sabra14G0014700 Salix brachista
SalBow7G3528 Salvia bowleyana
Sc02g0007590 Simmondsia chinensis
Sc15g0005500 Simmondsia chinensis
Sc15g0005820 Simmondsia chinensis
Sed0008652 Sechium edule
Sed0011342 Sechium edule
SEGI_04348 Sequoiadendron giganteum
SEGI_04440 Sequoiadendron giganteum
SEGI_08538 Sequoiadendron giganteum
SEGI_26864 Sequoiadendron giganteum
SEGI_31117 Sequoiadendron giganteum
SEGI_33552 Sequoiadendron giganteum
SGA_v2.0_scaffold197G41047 Striga asiatica
SHI08356 Sapria himalayana
SMO271G0134 Selaginella moellendorffii
Solyc04g078390.3 Solanum lycopersicum
Sopen04g031990 Solanum pennellii
Sp7g22190 Schrenkiella parvula
TAR381G0906 Trochodendron aralioides
TAR628G0756 Trochodendron aralioides
THA.LOC104825757 Tarenaya hassleriana
Thecc.08G095700 Theobroma cacao
Thhalv10000501m.g Eutrema salsugineum
Thhalv10026481m.g Eutrema salsugineum
TPR.G25607 Trifolium pratense
TWI09G1286 Tripterygium wilfordii
TWI56G0459 Tripterygium wilfordii
unitig_748.g7786 Utricularia gibba
vmacro04572 Vaccinium macrocarpon
vmacro23169 Vaccinium macrocarpon
VMungo1309G1530 Vigna mungo
VMungo1383G3095 Vigna mungo
Zm00001eb183250 Zea mays
Zm00001eb245180 Zea mays

User provided reference genes

Program Settings