Gene: Solyc04g078390.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g078390.3
  • Transcript Identifier Solyc04g078390.3.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 61113912-61114562 : positive

Gene Family Information

  • ID HOM05D004371
  • #Genes/#Species 163/87
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g078390.3.1
  • uniprot A0A3Q7GA49
  • gene_id Solyc04g078390

Descriptions

  • Description F-box protein GID2 (AHRD V3.3 *** A0A2G2ZRI1_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031146
IBA
IEA
GOA DatabaseSCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031146
IEA
InterProSCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0009740
IBA
GOA Databasegibberellic acid mediated signaling pathway
GO:0009938
ISO
PLAZA Integrative Orthologynegative regulation of gibberellic acid mediated signaling pathway AT4G24210
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin AT4G24210
GO:0010162
ISO
PLAZA Integrative Orthologyseed dormancy process AT4G24210
GO:0009939
ISO
PLAZA Integrative Orthologypositive regulation of gibberellic acid mediated signaling pathway AT4G24210
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT4G24210

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019005
IBA
IEA
GOA DatabaseSCF ubiquitin ligase complex
GO:0019005
IEA
InterProSCF ubiquitin ligase complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G24210

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001810 F-box domain
IPR045118 F-box only protein FBXO9/FBXO48
IPR036047 F-box-like domain superfamily
Mapman id Description
11.6.2.3 Phytohormone action.gibberellin.perception and signal transduction.substrate adaptor of SCF ubiquitin ligase (SLY)