Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p41850 Brassica napus
A06p28670 Brassica napus
Aa31LG11G1550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1186 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1280 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1281 Anthoceros agrestis
Actinidia18306 Actinidia chinensis
Actinidia36840 Actinidia chinensis
Ah.11g046840 Amaranthus hybridus
AL8G38730 Arabidopsis lyrata
Aqoxy4G00231 Aquilegia oxysepala
Aqoxy5G01090 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HJ5J7F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IBL9WM Arachis hypogaea
AT5G61970 Arabidopsis thaliana
ATR1096G004 Amborella trichopoda
Atru.chr6.1908 Acer truncatum
AUR62009528 Chenopodium quinoa
AUR62041693 Chenopodium quinoa
AUR62044173 Chenopodium quinoa
BcaB02g09609 Brassica carinata
BcaB07g29807 Brassica carinata
BcaC01g02451 Brassica carinata
BcaC03g18112 Brassica carinata
BolC2t12235H Brassica oleracea
BolC3t18767H Brassica oleracea
BraA02t09122Z Brassica rapa
BraA06t25807Z Brassica rapa
C02p61780 Brassica napus
C02p61790 Brassica napus
C03p65130 Brassica napus
CAN.G1210.1 Capsicum annuum
CAN.G865.5 Capsicum annuum
CANSAT80G0741 Cannabis sativa
CANSAT80G0883 Cannabis sativa
CARHR275760 Cardamine hirsuta
CARHR275770 Cardamine hirsuta
Carub.0005s0295 Capsella rubella
Carub.0008s2266 Capsella rubella
Ca_16811_v3 Cicer arietinum L.
CBR_g20988 Chara braunii
Cc00_g30130 Coffea canephora
Cc09_g07950 Coffea canephora
Cc09_g07980 Coffea canephora
Cc09_g07990 Coffea canephora
CDE04G3457 Ceratophyllum demersum
CDE07G0688 Ceratophyllum demersum
CDE07G1247 Ceratophyllum demersum
Cfa018712 Carpinus fangiana
Cfa027290 Carpinus fangiana
Ciclev10031005m.g Citrus clementina
CiPaw.09G139600 Carya illinoinensis
ClCG03G012650 Citrullus lanatus
COL.COLO4_03746 Corchorus olitorius
COL.COLO4_37247 Corchorus olitorius
Cpa.g.sc13.162 Carica papaya
Cre06.g267100 Chlamydomonas reinhardtii
CsaV3_1G043340 Cucumis sativus L.
CSS0009974 Camellia sinensis var. sinensis
CSS0022050 Camellia sinensis var. sinensis
CSS0034501 Camellia sinensis var. sinensis
CSS0048280 Camellia sinensis var. sinensis
DCAR_016350 Daucus carota
Dinv13728 Davidia involucrata
Dinv23217 Davidia involucrata
Duzib205G0720 Durio zibethinus
ECA232G2772 Erigeron canadensis
EL10Ac7g17942 Beta vulgaris
Eucgr.F03808 Eucalyptus grandis
FAN04G0329 Fragaria x ananassa
FAN08G1859 Fragaria x ananassa
FAN13G1968 Fragaria x ananassa
FAN18G1836 Fragaria x ananassa
FAN18G2676 Fragaria x ananassa
FvH4_5g09400 Fragaria vesca
Glyma.05G200600 Glycine max
Glyma.08G008000 Glycine max
Gohir.A07G047200 Gossypium hirsutum
Gohir.D07G051400 Gossypium hirsutum
Gorai.001G054500 Gossypium raimondii
GSVIVG01008641001 Vitis vinifera
HanXRQChr09g0273891 Helianthus annuus
Haze_07104 Corylus avellana
Haze_22596 Corylus avellana
Hma1.2p1_0493F.1_g164990 Hydrangea macrophylla
HPP92_028710 Vanilla planifolia
Hund02504 Selenicereus undatus
Hund31053 Selenicereus undatus
Hund31064 Selenicereus undatus
Lalb_Chr07g0183781 Lupinus albus
Lj4g0026438 Lotus japonicus
Lj5A87T69 Lonicera japonica
Lsat_1_v5_gn_4_84600 Lactuca sativa
Lsat_1_v5_gn_5_81961 Lactuca sativa
Lsat_1_v5_gn_8_114301 Lactuca sativa
Manes.06G126200 Manihot esculenta
Manes.14G045200 Manihot esculenta
Mapoly0153s0017 Marchantia polymorpha
MBI13_g13130_MAGBIO Magnolia biondii
MBI13_g15007_MAGBIO Magnolia biondii
MBI13_g43178_MAGBIO Magnolia biondii
MCO15G338 Micromonas commoda
MD06G1131700 Malus domestica
MD06G1146600 Malus domestica
MD14G1148000 Malus domestica
Medtr8g100110 Medicago truncatula
MELO3C015126.2 Cucumis melo
Migut.I00617 Erythranthe guttata
MSTRG.22850 Avicennia marina
Nitab4.5_0007718g0050 Nicotiana tabacum
Nitab4.5_0009429g0030 Nicotiana tabacum
Nitab4.5_0017885g0010 Nicotiana tabacum
Nn4g22142 Nelumbo nucifera
Oeu012844.2 Olea europaea
Os08g0323000 Oryza sativa ssp. japonica
Os08g0323266 Oryza sativa ssp. japonica
Peaxi162Scf00935g00018 Petunia axillaris
PGR083G0006 Punica granatum
PGSC0003DMG400015501 Solanum tuberosum
Phvul.002G282000 Phaseolus vulgaris
Potri.012G106200 Populus trichocarpa
Potri.015G105600 Populus trichocarpa
Pp3c15_22190 Physcomitrium patens
PRCOL_00003443 Prasinoderma coloniale
Prupe.5G142700 Prunus persica
Psat7g039240 Pisum sativum
PSO017G7154 Papaver somniferum
PSO081G0143 Papaver somniferum
PSO478G2811 Papaver somniferum
QL10p000650 Quercus lobata
RcHm_v2.0_Chr7g0188791 Rosa chinensis
Rhsim08G0196600 Rhododendron simsii
Sabra12G0078600 Salix brachista
Sabra15G0125900 Salix brachista
SalBow1G7365 Salvia bowleyana
Sc22g0003470 Simmondsia chinensis
Sed0013101 Sechium edule
Sed0023904 Sechium edule
SEGI_15405 Sequoiadendron giganteum
SGA_v2.0_scaffold40G15626 Striga asiatica
SGA_v2.0_scaffold74G24730 Striga asiatica
SMO356G0738 Selaginella moellendorffii
Solyc02g062810.4 Solanum lycopersicum
Solyc02g062830.2 Solanum lycopersicum
Solyc02g062840.1 Solanum lycopersicum
Solyc03g093970.3 Solanum lycopersicum
Solyc04g048930.1 Solanum lycopersicum
Sopen02g013850 Solanum pennellii
Sopen02g013860 Solanum pennellii
Sopen03g024820 Solanum pennellii
Sp2g25150 Schrenkiella parvula
TAR374G0799 Trochodendron aralioides
TAR622G0210 Trochodendron aralioides
THA.LOC104819422 Tarenaya hassleriana
THA.LOC104823903 Tarenaya hassleriana
Thecc.03G139600 Theobroma cacao
Thhalv10003854m.g Eutrema salsugineum
TPR.G12807 Trifolium pratense
TWI39G0623 Tripterygium wilfordii
unitig_32.g11043 Utricularia gibba
vmacro06162 Vaccinium macrocarpon
vmacro19178 Vaccinium macrocarpon
VMungo0251G1423 Vigna mungo
Zm00001eb202340 Zea mays
Zm00001eb327290 Zea mays

User provided reference genes

Program Settings