Gene: Lsat_1_v5_gn_8_114301

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_8_114301
  • Transcript Identifier Lsat_1_v5_gn_8_114301.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_8 : 173636637-173643721 : positive

Gene Family Information

  • ID HOM05D004329
  • #Genes/#Species 165/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_8_114301.v5
  • pacid 38954927

Descriptions

  • Description PF00623//PF16969 - RNA polymerase Rpb1, domain 2 (RNA_pol_Rpb1_2) // RNA-binding signal recognition particle 68 (SRP68)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006614
ISO
PLAZA Homology (enrichment)SRP-dependent cotranslational protein targeting to membrane HOM05D004329

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0030942
ISO
PLAZA Homology (enrichment)endoplasmic reticulum signal peptide binding HOM05D004329
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D004329
GO:0008312
ISO
PLAZA Homology (enrichment)7S RNA binding HOM05D004329
GO:0005047
ISO
PLAZA Homology (enrichment)signal recognition particle binding HOM05D004329

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005786
ISO
PLAZA Homology (enrichment)signal recognition particle, endoplasmic reticulum targeting HOM05D004329

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR000722 RNA polymerase, alpha subunit
Mapman id Description
35.1 not assigned.annotated