Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p34090 Brassica napus
A05p28030 Brassica napus
A05p28060 Brassica napus
A05p28070 Brassica napus
Aa31LG8G7480 Aethionema arabicum
Aa31LG8G7490 Aethionema arabicum
Aa31LG8G7500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.25 Anthoceros agrestis
Actinidia10705 Actinidia chinensis
Actinidia35316 Actinidia chinensis
AL3G34660 Arabidopsis lyrata
Aqoxy6G01703 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.08T3T7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.43SLKT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IBM9RL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z28QK4 Arachis hypogaea
AT3G20740 Arabidopsis thaliana
ATR0073G014 Amborella trichopoda
Atru.chr2.3209 Acer truncatum
AUR62015644 Chenopodium quinoa
AUR62020555 Chenopodium quinoa
BcaB04g20634 Brassica carinata
BcaB06g26144 Brassica carinata
BcaB06g26146 Brassica carinata
BcaC05g28285 Brassica carinata
BcaC05g28287 Brassica carinata
BcaC05g28288 Brassica carinata
BcaC09g49015 Brassica carinata
BolC1t04310H Brassica oleracea
BolC5t33065H Brassica oleracea
BolC5t33069H Brassica oleracea
BolC5t33070H Brassica oleracea
BolC6t36105H Brassica oleracea
BraA01t03513Z Brassica rapa
BraA05t21685Z Brassica rapa
BraA05t21687Z Brassica rapa
BraA05t21688Z Brassica rapa
BraA05t21689Z Brassica rapa
C01p43500 Brassica napus
C05p43330 Brassica napus
C05p43430 Brassica napus
C05p43440 Brassica napus
C05p43450 Brassica napus
C05p43470 Brassica napus
C06p10310 Brassica napus
CAN.G337.148 Capsicum annuum
CANSAT25G0949 Cannabis sativa
CARHR096560 Cardamine hirsuta
Carub.0003s2070 Capsella rubella
Ca_12696_v3 Cicer arietinum L.
CBR_g21046 Chara braunii
Cc05_g13230 Coffea canephora
CDE05G1308 Ceratophyllum demersum
Cfa020416 Carpinus fangiana
Cfa024711 Carpinus fangiana
Ciclev10008697m.g Citrus clementina
CiPaw.11G183600 Carya illinoinensis
ClCG05G014780 Citrullus lanatus
COL.COLO4_09570 Corchorus olitorius
Cpa.g.sc97.70 Carica papaya
Cre03.g180050 Chlamydomonas reinhardtii
Cre16.g693750 Chlamydomonas reinhardtii
CsaV3_3G022910 Cucumis sativus L.
CsaV3_UNG229030 Cucumis sativus L.
CSS0011160 Camellia sinensis var. sinensis
DCAR_006577 Daucus carota
DCAR_008679 Daucus carota
Dinv22305 Davidia involucrata
Duzib116G0859 Durio zibethinus
Duzib213G0708 Durio zibethinus
ECA236G2119 Erigeron canadensis
EL10Ac4g07972 Beta vulgaris
Eucgr.F03425 Eucalyptus grandis
FAN11G3136 Fragaria x ananassa
FAN21G3328 Fragaria x ananassa
FAN25G1427 Fragaria x ananassa
FvH4_3g21810 Fragaria vesca
Glyma.02G152200 Glycine max
Glyma.10G022000 Glycine max
Glyma.12G214400 Glycine max
Glyma.13G287200 Glycine max
Gohir.A13G141400 Gossypium hirsutum
Gohir.D13G146100 Gossypium hirsutum
Gorai.013G163900 Gossypium raimondii
GSVIVG01014605001 Vitis vinifera
HanXRQChr09g0244121 Helianthus annuus
HanXRQChr11g0332981 Helianthus annuus
HanXRQChr15g0495681 Helianthus annuus
Haze_09609 Corylus avellana
Haze_27219 Corylus avellana
Hma1.2p1_0562F.1_g179020 Hydrangea macrophylla
Hma1.2p1_1549F.1_g290070 Hydrangea macrophylla
HPP92_002196 Vanilla planifolia
Hund23308 Selenicereus undatus
Lalb_Chr14g0366111 Lupinus albus
Lalb_Chr14g0366131 Lupinus albus
Lj3g0015514 Lotus japonicus
Lj8A165T113 Lonicera japonica
Lsat_1_v5_gn_7_108381 Lactuca sativa
Manes.15G076500 Manihot esculenta
Mapoly0006s0078 Marchantia polymorpha
MBI18_g30687_MAGBIO Magnolia biondii
MCO02G487 Micromonas commoda
MCO04G208 Micromonas commoda
MCO04G236 Micromonas commoda
MD03G1211700 Malus domestica
MD11G1227100 Malus domestica
Medtr1g028310 Medicago truncatula
MELO3C018124.2 Cucumis melo
Migut.M01812 Erythranthe guttata
MSTRG.6890 Avicennia marina
Nitab4.5_0000397g0030 Nicotiana tabacum
Nitab4.5_0009192g0020 Nicotiana tabacum
Nn1g06998 Nelumbo nucifera
Oeu062615.1 Olea europaea
Oeu062616.1 Olea europaea
Os08g0137100 Oryza sativa ssp. japonica
Os08g0137250 Oryza sativa ssp. japonica
Peaxi162Scf01086g00127 Petunia axillaris
Peaxi162Scf01086g00145 Petunia axillaris
PGR031G3547 Punica granatum
PGSC0003DMG401019226 Solanum tuberosum
Phvul.005G091500 Phaseolus vulgaris
Phvul.007G166700 Phaseolus vulgaris
Potri.001G417300 Populus trichocarpa
Pp3c24_1010 Physcomitrium patens
PRCOL_00001232 Prasinoderma coloniale
Prupe.4G202200 Prunus persica
Psat6g038960 Pisum sativum
PSO339G5963 Papaver somniferum
PSO384G4488 Papaver somniferum
PSO541G5632 Papaver somniferum
PSO675G7739 Papaver somniferum
QL08p013340 Quercus lobata
QL08p013461 Quercus lobata
QL08p013465 Quercus lobata
QL08p013781 Quercus lobata
RcHm_v2.0_Chr5g0037411 Rosa chinensis
RhsimUnG0253200 Rhododendron simsii
Sabra16G0283500 Salix brachista
SalBow1G0135 Salvia bowleyana
SalBow1G3580 Salvia bowleyana
SalBow1G5971 Salvia bowleyana
SalBow3G2463 Salvia bowleyana
SalBow6G7263 Salvia bowleyana
Sc07g0002710 Simmondsia chinensis
Sed0007148 Sechium edule
SEGI_02518 Sequoiadendron giganteum
SGA_v2.0_scaffold9G04799 Striga asiatica
SMO347G0342 Selaginella moellendorffii
Solyc07g064090.3 Solanum lycopersicum
Sopen07g032230 Solanum pennellii
Sp3g18760 Schrenkiella parvula
TAR624G0412 Trochodendron aralioides
THA.LOC104825403 Tarenaya hassleriana
Thecc.07G052900 Theobroma cacao
Thhalv10020971m.g Eutrema salsugineum
TPR.G33318 Trifolium pratense
TWI39G0013 Tripterygium wilfordii
unitig_746.g26649 Utricularia gibba
vmacro09746 Vaccinium macrocarpon
VMungo0251G2959 Vigna mungo
VMungo1215G3096 Vigna mungo
Zm00001eb173090 Zea mays
Zm00001eb416950 Zea mays

User provided reference genes

Program Settings